Gavialis gangeticus (Gharial): 109288925
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Entry
109288925 CDS
T07453
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109288925 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109288925 (MBD4)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109288925 (MBD4)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
109288925 (MBD4)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109288925 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
109288925
NCBI-ProteinID:
XP_019360207
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MAAPEVGEQGKGSAFSDMQTKDEGNQLVTETEEHFDSQIKGTETIAENSLLHKEDAAVVS
EVVVACHKVVPNGWEKITKQRQSGKTAGKYDVYFISPEGMKLRSKRALVEYFHKTGETSF
KPEDFDFTAPAQSNTKVRAKKCSAKAVKTAIQKKELNNTKQECSAQNCKGGGSVQLLQTI
DEEQENISFTFTQGTEDLVVKECKPKDDSLAVKENGITEKRVQIKKARKRSEKKNPACTQ
NKRQRKVSCNKQEVEINKSKTFQRKNNACASDSSGAGDQNSNDVDTGKCGGDLGNALTSG
SQSEVNLGPVLAHSEEALGTTVELACSERSSDDTATKDSEENSAESEFGQGKDEMLLQSQ
DFTSNAQTEISSSQPCGKKSLTSVKLLKEDYGPRTQVDRRKTSPYFSSKYNKEAPSPPRR
KAFRKWTPPRSPFNLVQEILFHDPWKLLIATIFLNKTAGKMAIPALWEFLEKYPSPEVTR
TADWKEVSELLKPLGLYELRAKTIIKFSDEYLSKRWKYPIELHGIGKYGNDSYRIFCVNE
WKEVRPQDHKLNIYHAWLWENYTKLSLD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccggaagtaggggagcaaggaaagggcagtgccttcagtgacatgcaaaca
aaagatgaaggaaaccaattagtgacagagacagaagaacattttgattcacaaatcaaa
ggtactgagaccatagcagagaacagtctcctgcataaagaagatgcagctgttgtctct
gaagtggttgttgcatgtcacaaagtcgttccaaatggatgggagaagatcacaaagcaa
agacagtcgggcaaaactgcaggaaaatatgatgtttattttatcagtcctgaaggaatg
aagttaagatcgaaacgtgcacttgtagagtattttcataaaactggagaaaccagtttt
aaaccagaagattttgattttactgctcctgctcaaagtaataccaaggtgagagccaaa
aaatgcagtgcaaaagctgtgaaaaccgcaatacagaaaaaggaacttaacaatacaaaa
caagagtgtagtgcacaaaattgtaaaggcggtggtagtgttcagttacttcagactatt
gatgaagaacaggaaaacatttctttcacattcacccagggaacagaagacttggtcgtt
aaagaatgtaaaccaaaggatgattctttggcagttaaagaaaatgggataactgaaaaa
agagttcaaattaagaaagctagaaaaaggtcagaaaagaagaatccagcttgtacccag
aacaaaagacagagaaaagtatcatgtaataaacaagaagttgaaataaataaaagcaaa
acattccagagaaagaataatgcttgtgcttctgatagtagcggagctggtgatcagaac
tcaaatgatgtggatacaggaaaatgtgggggagacttgggaaacgcactgacttcaggc
tcgcaatcagaggtgaatcttggaccagtcttagctcactcggaagaggcattaggaacc
acagtggagttagcctgctcagagaggagttctgatgatacagctacaaaagactctgag
gagaactctgcagaatcagaatttgggcaggggaaggatgaaatgcttttgcagagccag
gacttcacatctaatgctcaaacagaaatcagcagttcacagccttgtggcaagaaaagt
ttgacatcagttaaattgctgaaagaagattatggcccaagaacacaggtggacagaagg
aaaaccagcccgtatttttccagtaaatacaataaagaagctccaagcccacctaggcgg
aaggccttcagaaaatggactcctcctcggtctccttttaatttggtccaagaaatactc
tttcatgatccctggaaactcctcatcgcaaccatatttctcaacaaaactgcaggtaaa
atggcaatccctgcactctgggagtttctggagaaatacccttcccctgaagtcacaaga
acagctgactggaaggaagtgtcagagttgcttaaacctcttggcctctatgaactgaga
gcgaagaccattatcaagttttcagatgagtatctgagcaagcgatggaagtaccctatt
gaactgcatggaattggaaaatatggaaatgattcctacagaatcttttgtgttaatgag
tggaaggaggtacgcccacaagatcacaaattaaatatatatcatgcctggctctgggaa
aactacacaaaactgagccttgattga
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