Gavialis gangeticus (Gharial): 109295113
Help
Entry
109295113 CDS
T07453
Symbol
OPTC
Name
(RefSeq) opticin
KO
K08128
opticin
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ggn00535
]
109295113 (OPTC)
Proteoglycans [BR:
ggn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
109295113 (OPTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
109295113
NCBI-ProteinID:
XP_019369313
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MAGPCGGKRRVTMGEGKRGSLPSPFSSSTSGEGRFGLSQADRKEQGHRMPSVVLLGMITL
ALAALALAVPLGEGKKTEEPSADLTIYESLNLDNYDLSLSNYGDIIDLSNYDELYDYGDL
APKIEVGTLAPPAKTPEGMPSTRAVPTAAPRKWPPMSTTANPVGPGLLGFVTEQGLSTCL
LCMCIGTSVYCDDAGLEHIPALPLETMYLYARFNSIGQIRARDFAGLKKLKRIDLTSNYI
SSVEEGSFRQLTSLQDLILPENRLTVLPDLPSSIIQLDARFNGIQSSGLRPEAFRELKKL
QFLHLSDNELDYIPAPLPESLRSLHLQNNNIQTMHQDTFCDSQDLTHIRRALEDIRLDGN
PINLSLFPSAYFCLPRLPTGRFY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctggcccctgcgggggcaagagaagggtcaccatgggggaggggaagcggggcagc
ctcccgagccctttcagctccagcacatcaggagaggggaggttcgggctctcccaggca
gacaggaaggagcaagggcacaggatgccgagtgtggtgttgctggggatgatcaccctg
gcgctggcagctctggctttggctgtcccgcttggagaagggaagaagacagaggagccc
agtgctgacctcaccatctatgagagccttaacttggacaactacgatctcagcctgagc
aactatggggacatcattgacttgagcaactatgacgagctgtacgactatggtgatctg
gccccgaagattgaggttggcacgttggctcctccagccaaaacccctgaaggcatgcca
agcaccagagccgtgccaactgctgcaccaaggaaatggccccccatgtccaccacagcg
aaccctgtcgggccagggctgctcgggttcgtaactgaacagggcctgtccacctgcctg
ctgtgcatgtgcatcggcacctccgtgtactgcgacgacgctggcctggagcacatccct
gctctgccactggagaccatgtacctctatgcccgcttcaacagcatcggccagatcaga
gccagggattttgctgggctgaagaagctgaagagaatagacctgacaagtaactacatc
tcctcggtggaggagggctccttccgccagctaaccagcctgcaggacctcatcctcccc
gagaacaggctgacagtgctgcctgacctgcccagcagtatcatccagctggatgcccgg
ttcaacgggatccagagctctgggctcaggcccgaagccttcagggagctgaagaagctg
cagttcctccacttgtctgataatgagctggactatatcccagcacccctgcctgagagc
ctgcgatccctgcacctccagaataacaacatccagaccatgcaccaggacacattctgt
gacagccaggacctcacccacatccgccgggcgctggaggacatccgtttggacggcaac
cccatcaacctgagcctctttcccagtgcttacttctgcctgccgcgcctccccacgggc
cgcttctactga
DBGET
integrated database retrieval system
