Gavialis gangeticus (Gharial): 109296814
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Entry
109296814 CDS
T07453
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109296814 (TRERF1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
109296814 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
Myb_DNA-bind_7
zf-met
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
109296814
NCBI-ProteinID:
XP_019371939
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MGDQQLYKTNHTANSNDNLYYQHHQVNSVPALNHSYGTSIMDASQASPLSPQYPQDSRDS
IALTVGSKSVGSLDSSRPTSWTHSGSGNHVAVRNNLNSQNAMWSPLGQGESADGYQYPYS
PANEVRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMTQVLHAQSSVMDNVNDSALRQLL
SQKSSIEQQPATSTVQRYQQVPQQVHQSFASPQQKQQMQVMQHPQQLYYDYQQHLSQMQM
HSAVQPGQPHVQQLQSQQLLPQHLQHLQQSQYYLQQQPQQGQQRFSIQEMQQRQCPMQIA
QYYQTQPAMQQLQPQQQMDLQLPYHRDPDPKTLHEAHQYSQDQSHPVQLIQLGAVPQYCY
QDPQQQYRHLYSQTLLQQQEQQQEDDTSQEKQYQNDNRSQALMNSHISLSASEAMEDPTE
QEINSVSNTLPHRTLLPPSGGHLNSKGAPQESPTAIWPPQMQLSDGRLQPLSPEQSDQNR
ALFPEKANTKNKLTCSICLKEFKSLPALNGHMRSHGGVRASPSFKQEESEKPLQQQPPKE
VDSLAPIVMPVSVPVKLLSPEPSTQPTTNSTTVKDKPANSVSDDEMPVLVKMTYSPPCSP
KVANPCSSSEVDKKPPPSASKLEENFKPLQDKKKYRHRPEPLFIPPPSFNFPASYSGATL
YQSQLRSPRILGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHGASHPQLPLTP
LTPTPRVFLCRSNSIDGNNVPVTPGPGEQTVDIEPRINIGSRFQADIPDLQDGSLIEKDM
HKATLVWKPWPELENKGFQQKVDTLLNMCCSSVLPGGGTNSEYALHSLFEAKGDVMATLE
MLLLKKQERMKCHPLANYHYAGSDKWTKPERKLFKDALSIYSKDFLFVQKMVKSKTVAQC
VEYYYTWKKIMRLGRKHRTRLEKKRDECLTSGEEEVLEDEEEVEDDRKCVKEEESEIQKS
PEPPPIPLAPIDLPPLQSLSLSAASFICEMPNCGAVFSSRQALNGHARIHGGTNPMTKTR
CTVSVAKQKSGTQSGHGSVKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTH
RQQEEQQRQKAQKAAVATEMAATIARTTGPVGHGMIPLDHMDLIKHVEDLDDDVVQELGN
VMEENEVMEADLLLDDEDADLLQDDAEL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagttgtacaaaactaaccacactgccaacagcaatgataacttgtac
tatcaacaccaccaggtaaactctgtccctgctttaaaccacagctacggaacatcaatc
atggatgcttctcaggcttcccccctctctccacagtatccccaggattcaagggacagt
atagctttgactgtaggttcaaaaagcgttgggtcattggattcatcccgaccaaccagt
tggacacattctggctcaggaaaccatgttgcagtaaggaacaatctaaacagtcagaat
gcaatgtggagccctctagggcagggtgaatcagctgatggataccaatatccgtactct
ccagctaatgaagttcgatcacagaaaatcacgagtggggttttacataaactagactcc
tttacgcaagtatttgctaaccaaaacttaagaattcaagtcaacaacatgactcaggtc
ttgcacgctcagtcttcagtgatggataatgtcaatgacagcgcattgagacaactgctg
tctcaaaagtctagcattgagcagcagcctgcaacttccactgtgcaaagataccaacaa
gtgccacagcaagtacatcagagttttgcaagcccacagcaaaagcaacaaatgcaagtc
atgcagcacccacaacagttgtattatgactaccagcaacacctctcccaaatgcagatg
cattctgcagttcagccaggccagccacacgtgcaacaattgcagtctcagcagctgtta
ccacaacatttacagcatttacagcagagccaatattacctgcagcagcagccacagcag
ggacagcagcggttttcaatacaagaaatgcagcagaggcagtgtccaatgcaaatagca
cagtattatcaaacacaacctgctatgcagcagttgcagccacagcagcagatggactta
cagctgccttatcacagggatcctgacccaaagactctgcatgaagcgcaccagtattcc
caggatcagtctcatcctgtacagcttatacagttgggagcagtgcctcagtattgctac
caagatccacagcagcagtataggcatttgtattcgcagaccttactacaacaacaggag
cagcaacaagaagacgacacgagtcaggaaaagcagtatcaaaatgacaacaggtctcaa
gctctgatgaactcccatattagcctctcggcatcagaggcaatggaggatcccacagag
caggaaattaattcagtcagtaatactcttcctcatcgaactctgttaccaccatcaggt
ggccatctaaatagcaaaggggctccgcaagagtctcccactgccatttggcctccgcag
atgcagctatcagatggcagactgcaaccgctgtcccctgagcaaagtgaccagaacaga
gcattgtttcctgagaaagccaatacaaagaacaagctaacatgttcaatatgcttgaag
gaatttaagagtttaccagccctaaatggtcatatgaggtcacatgggggagtaagagca
tctccgagctttaaacaggaggaaagcgagaaaccactacagcagcaaccgcctaaagag
gtggatagcctcgcgcccatcgtcatgcctgtttctgtccctgtaaagcttctgtcgcct
gagcccagcacgcagcccactaccaacagcaccacagtcaaagacaagcctgccaactct
gtatcagatgatgagatgccagttctcgtgaagatgacttactctccgccgtgcagtcca
aaagtggccaatccctgctcatcttctgaagtcgacaaaaagcctcctccaagtgcttca
aaattggaagaaaacttcaaacccctgcaggacaagaaaaaatatcgacataggcctgaa
ccgctcttcatacctcctccttccttcaacttccctgcatcctactcgggtgctacactc
tatcaaagtcaactacgctctccccgcatcctaggagaccatctgctagacaggacacat
gagcttcctccttacactccacctcctatgcttagcccagtacggcaaggatccggtctc
ttcagcagtgttatcacctcgtctcatggtgcatctcatccccaattgccactcacgcct
ctgacacccactccgcgggtcttcctgtgtcgatctaatagtattgatggaaacaatgtt
ccagtgactccagggcctggagaacagactgttgacatagaaccacgaatcaatattggg
tcacgattccaggctgatatccctgatttacaagatggatcattaatagagaaagacatg
cacaaggcaactttagtttggaagccatggccagaactggaaaataaaggcttccaacaa
aaagtggacaccctcttaaatatgtgttgttcaagtgtgttacctggtggaggaactaat
tcagagtatgctttacactctctctttgaggccaaaggagatgttatggctactctagag
atgctccttttgaagaagcaagaaagaatgaagtgtcatcctttggcaaattaccactat
gctggatctgacaagtggacgaaacccgaaagaaagctttttaaggatgcactgtccatt
tacagcaaagattttctttttgtacagaaaatggttaagtctaagacagttgcacagtgt
gtggaatactactatacttggaagaaaatcatgcgtctgggacggaaacacagaacacgt
ttagaaaaaaagagagatgaatgcctgacaagtggagaagaggaggttttagaggatgag
gaagaggtggaagacgacagaaaatgtgtaaaagaagaggaaagtgaaatacagaaatcc
cctgaaccaccacctatcccacttgcacctatagacctgccaccccttcaaagtctctca
ctttctgcagcctcttttatctgtgaaatgccaaactgtggtgctgtgttcagctccaga
caagcactaaatggccatgcccgtattcacggaggtaccaatccaatgacaaaaacaagg
tgtacagtttcagtcgctaagcaaaaatctgggacacagagtggacacggttcagttaag
agctcacctgcacacagcacaacaagtggtgagacggacccaacaacaatttttccttgt
aaagaatgtggcaaggtgtttttcaaaatcaaaagtcgcaatgctcatatgaagactcac
agacaacaggaagaacaacaaaggcaaaaagctcaaaaagctgctgttgcaacagaaatg
gccgctactattgcaagaactactgggccagttggacatggtatgatccctctggatcat
atggatttgattaaacatgtggaggaccttgatgacgatgttgttcaggagttgggtaat
gtcatggaagagaatgaagtcatggaagctgacctcttgttggatgatgaagatgcagat
ctactgcaggatgatgctgagctgtaa
DBGET
integrated database retrieval system
