Gavialis gangeticus (Gharial): 109301957
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Entry
109301957 CDS
T07453
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggn01002
]
109301957 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109301957 (USP40)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109301957 (USP40)
Peptidases and inhibitors [BR:
ggn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109301957 (USP40)
Ubiquitin system [BR:
ggn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109301957 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
Motif
Other DBs
NCBI-GeneID:
109301957
NCBI-ProteinID:
XP_019378909
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MFGDLFEEEPSLAPGLPCGPGKKAKTRDAEPPAPREVTHLSGIKNQGGTCYLNSLLQTLL
FTPEFREALFSLGPEELGSLEDNNKPDAKVRIIPLQLQRLFAQLLLLDQQAASTTDLTDS
FGWSSNEEVRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTLVNQIVCKECKNISE
RQEDFLDLTVAVKNVSGLEEALWNMYVEEEYFENDNLYRCGACNKLVEASKSAKLRKLPP
FLTISLLRFNFDFEKCERYKETSCYTFPFRINLRPFCEQTELDDLEYMFDLFSVIIHKGG
CYGGHYHVYIKDVDELGNWQLQEEGNKLTKDKFVKDNESGKENENPLTDLKEILSQEESK
QIPVDQLGQKFLERKGISWNKKYRKPFGPLRKYLQSHSQVFLFSPDGNKISLKENYHKLQ
FGPDSQGQDLQSPSQNNNVQWTSEKLSTRLKDDASGSHWFDLNDSKVQPIKEKDIEEQFQ
GKESAYMLFYRKSQLKRPSEAHANPRYGIPEHLLNEMNAANAELQKRRAECDSADNNIDL
HLHLASRYKFYNGALHPSLSRKESVLDLTIDKRKTLGDLRQSVFQLLEFWEGDQILSTAK
SLPAGLHLYQTLNGDELTLDGIGLADGADIFVWNGKEVGGIDVLTGLDHEPVLLNVLRLA
GYNEGGKGQHFTESQHIFPCSAELSTLCKALTSSRGIILMNSSGSDSEAKNWKVISEENM
KKTVKTTGLTDGSSILVLDSHDQSLVNVVDGNLTAFTHDISWLQVKNLCRLEAEERLVKI
TATIETVMSDIKITAIRELQLEEQLVNDICLRPINRNGKLLSPVPEDYTVKEAELKMGSL
LGLCHGKAPTSTQLFLYFVIGNDLQAVPEMEIVVEETATVKECLNLMLEKSGLPGDSWHL
RRIDWCYEAGEALSEENATLKELNVCNGDTLVITEGKLPPKGFLKVPIWWYEPLIYYGHQ
EPIQNQVNGVTCKIGDLEVSSAGTSSTYIQTDVRLCYMGDVEISGKASLADLKIQAMTLP
SFQEFSVPSPEFLRAWTVESKRPGKLLRNNQQQLNEYKLGGKAEICIEPLQKEESLSPSD
LLLRVQMRIPGERDYYCSVDLLWDISKECTALALRQRLAAHYSLPVDKTEIAKHFPEKFE
WMPISSWTQQISKRKRKKKQESLQSAPYYLKDGDIIGVKNLLLDDSKDFSTMRDDIGKEK
LRQLAVEKKKSRQAEHLQNDVFSEGKVAPKHRKPEVALSINVGVFR
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttcggggacctgttcgaggaggagccgtcccttgcgcccggcctcccttgtggcccc
gggaagaaggccaagacgcgggatgcggagccgccggccccgagggaggtcacccattta
agtgggattaagaaccagggcgggacctgctacctcaactccctgctgcagactctgctt
ttcacgccagagttcagagaggcactgttttctctaggccctgaagaacttggttctctg
gaagataacaataaaccagatgcaaaggttcggataattccattacagttacaacggttg
tttgctcagcttttgctcttagatcagcaggctgcatctacaacagacctcactgacagc
tttggatggagcagcaatgaggaagtgaggcaacatgatgtgcaggagttaaatcggatt
ctgttcagtgctttggaaacttcccttgtgggtacttctggccatgaccttattaatcgc
ctgtaccatggaactcttgttaaccagattgtttgtaaagaatgcaagaacattagtgag
agacaggaagatttcttagacctaacagtggctgtaaagaatgtatctggcttggaggag
gccctgtggaacatgtatgtggaagaggaatattttgaaaatgataatctatatcgatgt
ggagcatgcaataaactggttgaagcatcaaagtctgccaaactacgcaagttgcctcca
tttctcactatctccctcctgaggtttaactttgattttgagaagtgtgaacgatacaag
gaaacgagctgctatacattccctttccggataaacctcaggcctttttgtgagcagact
gagttggatgatttggagtacatgttcgacctcttttctgttattatacacaaaggtggt
tgctatggcggacattatcatgtttatatcaaagatgttgatgaattaggaaattggcaa
ttgcaagaggagggaaacaaactaactaaggataagtttgtaaaagataatgaaagtggc
aaagaaaatgagaatcctctgacagacctgaaagagatcttatcacaggaagaatctaaa
caaattcctgtggatcagttagggcagaaatttttagagagaaaagggatatcctggaac
aagaaataccggaaaccatttggaccattacgaaagtatttgcagagtcattctcaggta
tttctgttcagtcccgatggaaataagattagtctaaaagagaactaccacaagctccag
tttgggccagattctcaaggacaagatttgcagagcccttcccagaacaacaatgtccag
tggacttcagaaaaactgtcaacaagattaaaggatgacgcttctggttctcactggttt
gatttgaatgattcgaaagtccagccaattaaggagaaagatatagaggaacaatttcag
ggtaaagaaagtgcctacatgctgttttatcgaaaatcccaattgaaaagaccatctgaa
gctcatgcaaatccaaggtatggaattcctgaacacctcttgaatgaaatgaatgctgct
aatgctgaactgcagaagaggagggcagaatgtgactctgcagacaataacattgacttg
catcttcatttggcttctcgatataaattttacaatggggctctccacccatcgctttct
cggaaggaaagtgtgctggatctgactattgataaaagaaaaaccctaggagatctgcga
caatctgtatttcagctgttggaattttgggaaggagaccagattctcagtactgcaaag
tctctcccagcaggacttcatctttaccagacgcttaatggagatgaactgactctggat
ggcattggactagctgatggggcagacatctttgtgtggaatggaaaggaggttggtggc
atcgatgtgctgacaggccttgaccatgagcccgtacttctaaacgttcttcgtttagcg
gggtataacgaaggaggaaaaggtcagcacttcactgaatcccagcatatttttccatgc
agtgcagaactgagcactctgtgcaaagctttaacatcatcaagagggatcatcttaatg
aacagttcaggatcagacagtgaagctaaaaactggaaggtcatttctgaagagaatatg
aagaagacagtcaaaacaactggtttgacagatggaagctcaatactagttttagacagc
catgaccaaagcttggtaaatgtggtagatggcaatctgactgcttttacacatgatatc
agctggctacaagttaaaaatctctgcaggttggaggctgaagagagactagttaaaatt
actgcaactatagaaacagtgatgtcagatatcaaaattacagcaatacgggagttgcaa
ttagaggagcagttagtgaatgatatctgtctcagacctattaacagaaatgggaagctt
ctgtctccagtgccagaggattacactgtcaaagaagcagagctgaagatgggaagcttg
ctgggactgtgccatggaaaagctccaacttccactcagctcttcttgtattttgttatt
ggaaatgatctacaggcagtcccagaaatggaaatagttgttgaagagactgctactgtg
aaagagtgcctaaacttaatgctggagaaatctgggttaccaggtgacagctggcatttg
agaaggattgactggtgctatgaagctggagaggcattaagtgaggaaaatgccactttg
aaagaactcaatgtctgcaatggcgatacattggttataactgaggggaaacttccacca
aagggtttcctgaaagtacccatctggtggtatgaacctttgatttactacggacatcaa
gagcctattcagaaccaagtgaatggcgtgacctgtaagataggggatttggaagtatct
tcagctggaacttcttcaacgtacatccaaacagacgtgaggctttgttacatgggtgat
gtagaaatctctggaaaagcttctttggcagatctgaagattcaggccatgaccttgcca
tccttccaggagttcagtgtcccatcaccagagtttctcagagcctggacagtggaaagt
aagcgcccaggcaaacttttacgaaacaaccagcaacaactcaatgaatacaaactggga
ggcaaagcagaaatttgcatagaacctttacagaaagaagagagccttagccccagtgac
ttactacttcgagtacagatgcgcatacctggggagagggattattactgctctgtggat
ttgctgtgggatatctccaaggaatgcacagcattggcactgaggcagcgacttgctgca
cattattctcttcccgtggataaaactgaaattgctaaacacttccctgagaagtttgag
tggatgccaatatctagctggacccagcaaatttcaaagagaaaaagaaaaaaaaaacag
gagagtctgcagtcagcaccctattacctgaaagatggagatattattggtgtgaagaat
cttttacttgatgacagtaaggacttcagtaccatgagagatgatattggaaaagagaag
ctgaggcaacttgctgtggaaaaaaagaaaagcaggcaagcagagcatttgcagaatgat
gttttttctgagggaaaggtggctcctaaacatcgtaagccagaagtggctctttcaatc
aatgtgggagtcttcagatag
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integrated database retrieval system
