KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101127133Help
Entry
101127133         CDS       T02442                                 

Gene name
LIG1
Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03030  DNA replication
ggo03410  Base excision repair
ggo03420  Nucleotide excision repair
ggo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ggo00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    101127133 (LIG1)
   03410 Base excision repair
    101127133 (LIG1)
   03420 Nucleotide excision repair
    101127133 (LIG1)
   03430 Mismatch repair
    101127133 (LIG1)
Enzymes [BR:ggo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101127133 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     101127133 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     101127133 (LIG1)
DNA replication proteins [BR:ggo03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    101127133 (LIG1)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     101127133 (LIG1)
DNA repair and recombination proteins [BR:ggo03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     101127133 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     101127133 (LIG1)
   MMR (mismatch exicision repair)
    Other MMR factors
     101127133 (LIG1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF1685 Presenilin
Motif
Other DBs
NCBI-GeneID: 101127133
NCBI-ProteinID: XP_018871609
Ensembl: ENSGGOG00000015042
LinkDB All DBs
Position
19
AA seq 809 aa AA seqDB search
MDSSPSGIPKRRTARKQLPKRTIQEVLEEQSEDEDREAKRKKEEEEAETPKESLTEAEVA
TEKEGEDGDQPTTPPKPLKTSKAETPTEGGSEPEVATKQELQEEEEPTKPPPRAPRTLSS
FFTPRKPAVKKEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYL
AVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVG
DGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRD
IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT
PPGQEFPPAVVDAGKGKAAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE
HCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRN
QEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASE
IQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEF
LEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGK
RAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAV
IPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTS
AQVACLYRKQSQIQNQQGEDSGSDPEDTY
NT seq 2430 nt NT seq  +upstreamnt  +downstreamnt
atggacagttccccatcagggattccgaagcgtcgcacagctcggaagcagctcccgaaa
cggaccattcaggaagtcctggaagagcagagtgaggacgaggacagagaagccaagagg
aagaaggaggaggaagaagcggagaccccgaaagaaagcctcacagaggctgaagtggca
acagagaaggaaggagaagacggggaccagcccaccacgcctcccaagcccctaaagacc
tccaaagcagagaccccgacggaaggcggttcagagcctgaggtggccacgaagcaggaa
ctgcaggaggaggaagagccgaccaagcctccccccagagctcccaggacgctcagcagc
ttcttcaccccccggaagccagcagtcaaaaaagaagtgaaggaagaggagccaggggct
ccaggaaaggagggagctgctgagggacccctggatccatccggttacaatcctgccaag
aacaactatcatcccgtggaagatgcctgctggaaaccgggccagaaggttccttacctg
gccgtggcccggacgtttgagaagatcgaggaggtgtctgctcggctccggatggtggag
acgctgagcaacttgctgcgctccgtggtggccctgtcgcctccagacctccttcctgtc
ctctacctcagcctcaaccaccttgggccgccccagcagggcctggagcttggcgtgggt
gatggtgtccttctcaaggcagtggcccaggccacaggtcgccagctggagtctgtccgg
gctgaggcagccgagaaaggcgacgtggggctggtggccgagaacagccgcagcacccag
aggctcatgctgccaccacctccgctcactgcctccggggtcttcagcaagttccgcgac
atcgccaggctcactggcagtgcttccacagccaagaagatagacatcatcaaaggcctc
tttgtggcctgccgccactcagaagcccggttcatcgccaggtccctgagcggacggctg
cgccttgggctggcagagcagtcggtgctggctgccctctcccaggcagtgagcctcacg
cccccgggccaagaattcccaccagccgtggtggatgctgggaagggcaaggcagcagag
gccagaaagacgtggctggaggagcaaggcatgatcctgaagcagacgttctgcgaggtt
cctgacctggaccgaattatccccgtgctgctggagcacggcctggaacgtctcccggag
cactgcaagctgagcccagggattcccctgaaaccaatgttggcccatcccacgcggggt
gtcagcgaggtcctgaaacgctttgaggaggcagctttcacctgcgaatacaaatatgac
gggcagagggcacagatccacgccctggaaggcggggaggtgaagatcttcagcaggaat
caggaagacaacactgggaagtacccggacatcatcagccgcatccccaagattaaactc
ccatcagtcacatccttcatcctggacaccgaagccgtggcttgggaccgggaaaagaag
cagatccagccattccaagtgctcaccacccgcaaacgcaaggaggtggatgcatccgag
atccaggtgcaggtgtgtttgtacgctttcgacctcatctacctcaatggagagtccctg
gtacgtgagcccctttcccggcgccggcagctgctccgggagaactttgtggagacagag
ggcgagtttgtcttcgccacctccctggacaccaaggatgtcgagcagatcgccgagttc
ctggagcagtcggtgaaagactcctgcgagggactgatggtgaagaccctggatgttgat
gccacctacgagatcgccaagagatcgcacaactggctcaagctgaagaaggactacctt
gatggcgtgggtgacaccctggacctggtggtgatcggcgcctacctgggccgggggaag
cgggccggccggtacgggggcttcctgctggcctcctacgacgaggacagtgaggagctg
caggccatatgcaagcttggaactggcttcagcgacgaggagctggaggagcatcaccag
agcctcaaggccctggtgctgcccagcccacgcccttacgtgcggatagatggcgctgtg
attcccgaccactggctggaccccagcgccgtgtgggaggtgaagtgcgctgacctctcc
ctctcccccatctaccctgctgcgcggggcctggtggatagtgacaagggcatctccctt
cgcttccctcggtttattcgagtccgtgaagacaaacagccggagcaggccaccaccagt
gcccaggtggcctgtttgtaccggaagcaaagtcagattcagaaccaacaaggcgaggac
tcaggctctgaccctgaagatacctactaa

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