KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101129547
Entry
101129547         CDS       T02442                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ggo03400]
    101129547 (MDC1)
DNA repair and recombination proteins [BR:ggo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101129547 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 101129547
NCBI-ProteinID: XP_030867818
Ensembl: ENSGGOG00000000729
LinkDB
Position
6:complement(30777055..30794422)
AA seq 1965 aa
MEDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMP
DCSVALPFPSISKQHAEIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRNQEL
ILFADLLCQYHRLDVSLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVDFLSERCM
VNKSRTTSSSVIVPESDEEGHSPVLGGLGPPFAFNLNSDTDVEEGQQPATEEASSAARRG
ATVEAKQSEAEVVTEIQLEKDQPLVKERDDDTKVKRGAGNGVVPAGVILERSQPPGEDSD
TDVDDDSRPPGRPAEVHLERAQPFGFIDNDTDVEEERIPATPVVIPMKKRKIFHGVGTRG
PGAPGLAHLQESQAGSDTDVEEGRAPQAVPLEKSQASMVINSDTDDEEEVSAALTLAHLK
ESQPAIWNRDAEEDMPQRVVLLQRSQTTTERDSDTDVEEEELPVENREAVLKDHTKIRAL
VRAHSEKDQPPFGDSDDSVEADKSSPGIHLERSQASTTVDINTQVEKEVPPGAAIIHIKK
HQVSVEGTNQTDVKAVGGPAKLLVVSLEEAWPLHGDCETDAEEGTSLAASAVADVRKSQL
PAEGDAGAEWTAAVLKQERAHEVGAQGGPPVAQVEQDLPISRENLTDLVVDTDTLGESTQ
PQREGAQVPTGREREQHVGGTKDSEDNYGDSEDLDLQATQCFLENQGLEAVQSMEDEPTQ
AFMLTPPQELGPSHCSFQTTGTLDEPWEVLATQPFCLREFEDSETQPFDTHLEAYGPCLS
PPRAIPGDQHPESPVHTEPMGIQGRGRQTVDKVMGIPKETAERVGPERGPLERETEKLLP
ERQTDVTGEEELTKGIQDREQKQLLARDTQRQESDKNGESASPERDRESLKVEIETSEEI
QVKQVQKQTLPSKAFEREVERPVANRECDPAELEEKVPKVILERDTQRGEPEGGSQDQKG
QASSPTLEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRI
RAAEVSRGDQESPDACLPPTVPEAPAPPQKPLNSHSQKHLAPPPLLSPLLPSIKPTVRKT
RQDGSQEAPEAPLSSELEPFHPKPKIRTWKSSRMTPFPATSAAPEPHPSTSTAQPVTPKP
TSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVKTPET
VVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVT
SEPTYQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQATRGRTNRSSMKT
PETVVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQ
PVTSEPTFRTTRGRKNRSSVKTPETVVPTAPELQPSTSIDQPVTPEPSSRATRGRTNRSS
VKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVVPTAPEPHPTTS
TDQPVTPKLTSRATRRKTNRSSIKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSKTL
RSSTVRAMAVPTTPEFQSPVTTDQPISPEPITQPSCIKRQRAAGNPGSLAAPIDHKPCSA
PLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPTHASQIQKVEPAGRSRFTPELQ
PKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVIIKEEEEDTAEKPGKEEDVVTPKPGKR
KRDQAEEESNRIPSRSLRRTKLNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEAS
HLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQ
DALSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQ
DFPHCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVLSPLEMSST
NT seq 5898 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctattgactgggatgttgaagaagaggaggagacagagcaatcc
agtgaatccttgaggtgtaacgtggagccagtagggcggctacatatctttagtggtgcc
catggaccagaaaaagatttcccactacacctcgggaagaatgtggtaggccgaatgcct
gactgctctgtggccctgccctttccatctatctccaaacaacatgcagagattgaaatc
ttagcctgggacaaggcacctatcctccgagactgtgggagccttaatggtactcaaatc
ctgagacctcctaaggttttgagccctggggtgagtcaccgtctgaggaaccaggaattg
attctctttgctgacttgctctgccagtaccatcgcctggatgtctctctgccctttgtc
tcccggggccctctgacagtagaagagacacccagggtacagggaggaactcaaccccag
aggcttctgctggctgaggactcggaggaggaagtagattttctttctgaaaggtgtatg
gtaaacaaatcaaggaccacatcttcctctgtgatagttccagagagtgatgaagagggg
cattcccctgtcctgggcggccttgggccgccttttgccttcaatttgaacagtgacaca
gatgtggaagaaggtcagcaaccagccacagaggaggcctcctcagctgccagaagaggt
gccactgtagaggcaaagcagtctgaagctgaagttgtaactgaaatccagcttgaaaag
gatcagcctttagtgaaggagagggacgatgatacaaaagtcaagaggggtgcagggaat
ggggtggttccagctggggtgattctggagaggagccaacctcctggagaggacagtgac
acagatgtggatgatgacagcaggcctcctggaaggccagctgaggtccatttggaaagg
gctcagccttttggcttcattgacaacgacactgatgtggaagaagagaggatcccagca
accccagttgtcattcctatgaagaagaggaagatcttccatggagtaggtacaaggggt
cctggagcaccaggcctggcccatctgcaggagagccaggctggtagtgatacagatgtg
gaggaaggcagggccccacaggctgtccctctggagaaaagccaagcttccatggttatc
aacagcgatacagatgacgaggaagaagtctcagcagcgctgactttggcacatctgaaa
gagagccagcctgctatatggaacagagatgcagaagaggacatgccccaacgtgtggtc
cttctgcagcgaagccaaaccaccactgagagagacagtgacacagacgtggaggaggaa
gagctcccagtggaaaatagagaagctgtcctcaaggatcacacaaagattagagccctt
gttagagcacattcagaaaaggaccaacctccttttggggacagtgatgacagtgtggaa
gcagataagagctcacctgggatccacctggagagaagccaagcctccaccacagtggac
atcaacacacaagtggagaaggaagtcccaccaggggcagccattatacatataaagaag
catcaggtgtctgtggaggggacaaatcaaacagatgtgaaagcagttgggggaccagca
aagctgcttgtggtatctctagaggaagcctggcctctgcatggggactgtgaaacagat
gcagaggagggcacctccttagcagcctcagcagttgcagatgtaagaaagagccagctt
ccagcagaaggggatgctggggcagagtggactgcagctgttcttaagcaggagagagct
catgaggtgggggcccagggtgggccacctgtggcacaagtagagcaggacctccctatc
tcaagagagaacctcacagatctggtggtggacacagacactctaggggaatccacccag
ccacagagagagggagcccaggtccccacaggaagggagagagaacaacatgtgggtggg
accaaggactctgaagacaactatggtgattctgaagatctggacctacaagctacccag
tgctttctggagaatcagggcctggaagcagtccagagcatggaggatgaacctacccag
gccttcatgttgactccaccccaagagcttggcccttcccattgcagcttccagacaaca
ggtaccctagatgaaccatgggaggtcctggctacacagccattctgtctgagagagttt
gaggactctgagacccagccttttgacacccaccttgaggcctatggaccttgcctgtct
ccacctagggcaataccaggagaccaacatccagagagcccagttcacacagagccaatg
gggattcaaggcagagggaggcagactgtggataaagtcatgggtataccaaaagaaaca
gcagagagggtgggccctgagagagggccattggagagagaaactgagaaactgctacca
gaaagacagacagatgtgacaggagaggaagaattaaccaaggggatacaggacagagaa
caaaaacagttgttagctagagacacccagagacaagaatctgacaaaaatggggaaagt
gcaagtcctgaaagagatagggagagtttgaaggtagaaattgagacatctgaggaaata
caagtgaaacaagtacagaagcagacccttccaagcaaagcatttgagagagaagtagag
agaccagtagcaaacagagagtgcgatccagccgagttagaagagaaggtgcccaaagtg
atcctggagagagatacacagagaggggagccagagggagggagccaggaccagaaaggg
caggcctccagcccaacactagagcctggggtgggggcgggggaccttccgggacctacc
tcagcccccgtaccttctgggagccagtcaggtggaaggggatccccagtgagccccagg
aggcatcagaaaggcctcctgaattgcaagatgccacctgctgagaaggcttccaggatc
agagctgctgaggtttccaggggcgatcaggaatctccagatgcttgtctgcctcctaca
gtgcctgaagccccagccccaccccaaaagccccttaactctcacagccagaaacatctt
gcacctccgccccttctttctccccttttaccttctatcaagccaaccgttcgtaagacc
aggcaagatgggagtcaggaagctccagaggctcccttgtcctcagagctggagcctttc
cacccaaagcctaaaattagaacttggaagtcctccagaatgacaccctttccagctacc
tctgctgcccctgagccccacccttccacctccacagcccagccagtcactcccaagccc
acatctcaggccactaggagcaggacaaataggtcctctgtcaagacccctgaaccagtt
gtccccacagcccctgagctccagccttccacctccacagaccagcctgtcacctctgag
cccacatctcaggttactaggggaagaaaaagtagatcctctgtcaagacccctgaaaca
gttgtgcccacagcccttgagctccagccttccacctccaccgaccgacctgtcacctct
gaacccacatctcaggctactaggggaagaaaaaatagatcctctgtcaagacccctgaa
ccagttgtccccacagcccctgagctccagccttccacctccacagaccagcctgtcact
tctgagcccacatatcaggctactaggggaagaaaaaatagatcctctgtcaagacccct
gaaccagttgtccccacagcccctgagctccagccttccacctccacagaccaacctgtc
acctctgagcccacatctcaggccactaggggcaggacaaataggtcctctatgaagacc
cctgaaacagttgtccccacagcccctgagctccagccttccacctccacagaccagcct
gtcacccctgagcctacgtctcaggctactaggggaagaacagatagatcctctgtcaag
actcctgaaacagttgtccccacagcccctgagctacaggcttccgcctccacagaccag
cctgtcacctctgagcccacatttcggaccactaggggaagaaaaaatcggtcctctgtc
aagacccctgaaacagttgtgcccacagcccctgagctccagccttccacctccatagac
caacctgtcacccctgagccctcatctcgggccactaggggcaggacaaataggtcctct
gtcaagactcctgaatcaattgtccctatagcccctgagcttcagccttccacctccaga
aaccagcttgtcacccctgagcccacatctcgggccactaggtgcaggacaaataggtcc
tctgtcaagacccctgagccagttgtccccacagcccctgagccccatcctaccacctcc
acagaccagcctgtcacccccaagctcacgtctagggccactaggagaaagacaaatagg
tcctctatcaagactcccaaaccagttgaaccagcagcctctgatcttgagccttttacc
cccacagaccagtctgtcacccctgaggccatagctcagggtggtcagagcaaaacactg
aggtcttccacagtaagagctatggcggttcctaccacccctgaattccaatctcctgtc
accacagaccagcctatttcccctgagcctattactcaacccagttgcatcaagaggcag
agagccgctgggaaccctggctccctcgcagctcccattgaccataagccttgctctgca
cccttggaacctaaatcccaggcctcaaggaaccaaagatggggagcagtgagagcagct
gaatcccttacagccattcctgagcctgcctctccccagcttcttgagacaccaactcat
gcctcccagatccaaaaggtggaaccagcaggtagatctaggttcaccccggagctccag
cctaaggcctctcaaagccgcaagaggtctttagctaccatggattcaccaccacatcag
aaacagccccaaagaggggaagtctcccagaagaccgtgattatcaaggaagaggaagaa
gatactgcagagaagccagggaaggaagaggatgtcgtgactccaaaaccaggcaagaga
aagagagaccaggcagaggaggagtccaacagaataccaagccgcagcctccgacggacc
aaacttaaccaagaatcaacagcccccaaagtgctcttcacaggagtggtggatgctcgg
ggagagcgggctgtgctggcactggggggaagtctggctggttcagcggcagaggcttcc
cacctggtcactgatcgcatccgccggacagtcaagttcctgtgtgccctggggcgggga
atccccattctgtccctggactggctgcatcagtcccgcaaggctggtttcttcttaccc
ccggatgaatatgtggtgaccgaccctgagcaagagaagaactttggctttagccttcaa
gacgcactgagccgggctcgggagcgaaggctgctagagggctatgagatctatgtgacc
cctggagtccagccaccaccacctcagatgggagagatcattagctgctgtggaggcaca
tacctacccagcatgcctcggtcctataagcctcagagagttgtgatcacatgccctcag
gacttccctcattgctccattccactacgggttgggctgcccctcctctcgcctgagttc
ctgctgactggagtgctgaagcaggaagccaagccagaggcctttgtcctctcccctttg
gagatgtcatccacctga

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