Gorilla gorilla gorilla (western lowland gorilla): 101130776
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Entry
101130776 CDS
T02442
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggo03021
]
101130776 (SCAF4)
03041 Spliceosome [BR:
ggo03041
]
101130776 (SCAF4)
Transcription machinery [BR:
ggo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101130776 (SCAF4)
Spliceosome [BR:
ggo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
101130776 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101130776
NCBI-ProteinID:
XP_030861127
Ensembl:
ENSGGOG00000015557
LinkDB
All DBs
Position
21:complement(17760052..17821666)
Genome browser
AA seq
1148 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL
PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA
TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP
PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC
IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE
RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI
PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT
YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK
PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP
PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS
IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAAPTNLPTPPVTQPVSLLGTQGVAPGPV
IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAM
PPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQQPQPQAPQQ
PQQQQQQQPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNR
NDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKE
KPEVTERAGGNKTVEPPISQVGNVDTASDLEKGVSEAAVLKPSEELPAEATSSVEPEKDS
GSAAEAPR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcgcttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccgggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaattgttcgtgtgctgaacctttggcaaaaaaat
ggagtgttcaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gcagccccagtagcagaaaatgttaccaataatgaaggctcacctccacctccagtaaaa
gtttcttctgaacctcccacacaagccactccaaactccgtcccagctgtaccacagttg
cccagctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccaacag
cttcagcagatccttcagacttttcagcagcctccaaaaccacagtctcctgcccttgac
aatgctgtgatggctcaggttcaggctatcacagctcagttaaagacaactcctacacaa
ccatctgaacaaaaagctgctttccccccacctgaacagaaaactgcatttgacaagaag
ttgcttgatagatttgactatgatgatgagccagaagctgtggaagaatcaaagaaagag
gataccactgccgtcaccacgacagcacctgctgccgctgtaccccctgcacccaccgcc
accgtgcctgctgctgctgcacccgctgctgcctctcctcctcctccacaggcaccattt
ggttttcctggagatggcatgcagcagccagcatacacacagcatcaaaatatggatcag
ttccagccacgaatgatgggaatacaacaggatccaatgcaccatcaggttccacttcct
cctaatggacaaatgccaggatttggacttcttcctacacctccatttcctcccatggct
cagcctgtgattcctccaactccaccagtgcagcagcctttccaagcttcttttcaggca
caaaatgaaccacttacacagaagccacatcagcaggaaatggaagtagaacaaccttgt
attcaagaggttaagcgacatatgtctgataacagaaagtcaagatctaggtcagcatcc
aggtcaccaaaaaggaggcgatctagatctggttctagatctcgaaggtctcggcatcga
cgttctcgatctcggtccagggatagacgccgacattctccccgatctcgatcccaagaa
agacgggatcgagaaaaagagagagaacgtcgacaaaaaggcctccctcaagtgaaaccg
gaaactgcaagtgtttgcagtactaccctctgggtggggcagctggacaaaagaactact
cagcaggatgttgccagtctcttggaagagtttggtccaattgaatcaattaatatgatt
cctcccaggggttgtgcctatattgttatggttcataggcaagatgcctatcgtgccctg
cagaaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgggcc
ttaaacaaaggaataaaggcagattataaacagtattgggatgtagaacttggtgttact
tatattccatgggacaaagtcaagcctgaggaactggagagtttttgtgaaggaggaatg
ttggacagtgacacacttaacccagattggaaaggaattcctaagaagcctgaaaatgaa
gttgctcaaaatggaggtgctgaaacctcacacacagaaccagtatcacccatacctaaa
ccattacctgtgcctgtccctcctattcctgttcctgcacctataacagtgccacctcca
caggtcccaccacatcaaccgggtccacctgtagttggtgctctccagccacctgctttc
acgcctcctctgggaataccgcctccaggctttggtcctggtgttcctcctccccctcct
cctccaccatttttgcgcccaggattcaacccaatgcatttaccaccaggttttctgcct
cctggacccccacctcctataactccaccagtatccattcctcctcctcacactccacca
ataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagacttatct
attggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtctggtgac
agcgtgaaaatgtatggctctgctgtgccacctgctgctgcacccacgaatctgcccacc
cctcctgtaacccagcctgtttcacttcttggcactcaaggagttgcccctggtcctgta
attggacttcaggcaccatctactggtcttcttggcgcccggcccggtctcatcccactc
cagcgccctccaggaatgcccccacctcacttacagcggttccctttgatgccaccccgt
cccatgccaccgcacatgatgcacagaggcccaccgccaggaccagggggctttgcgatg
cctccacctcatggaatgaaaggtcccttcccaccgcatggcccctttgttaggcctggt
ggaatgccagggctcgggggcccagggccaggcccagggggtcctgaagacagagacgga
aggcaacagccgccgcagcagccacagcagcagcagccacagccgcaggcgccccagcaa
ccacagcagcagcagcagcagcagccaccatcacaacagcctccaccaacacagcagcag
ccacagcagtttagaaatgataacaggcagcagttcaattcaggtagagaccaagaaagg
tttggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccgt
aatgatgatagagataatagtaaccgtgacaggagagagtggggaagaaggagccctgac
cgggacaggcacagagacttggaagagagaaatagacgctctagtgggcatcgagacaga
gagagagattctagagatagagagtctcgtagagagaaggaagaagcccgaggaaaggaa
aagcctgaggtgacagagagggcaggtggtaacaaaaccgttgaacctcccattagccaa
gtgggaaatgtagacactgcttcagaccttgagaagggggtgtctgaggctgcagtccta
aagccttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaaggattct
ggctcagcagcagaggctcctcgttag
DBGET
integrated database retrieval system
