Gorilla gorilla gorilla (western lowland gorilla): 101143148
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Entry
101143148 CDS
T02442
Symbol
COL16A1
Name
(RefSeq) collagen alpha-1(XVI) chain isoform X1
KO
K24339
collagen type XVI alpha
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101143148 (COL16A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
101143148
NCBI-ProteinID:
XP_004025396
Ensembl:
ENSGGOG00000015740
UniProt:
G3RI89
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All DBs
Position
1:complement(27469736..27521221)
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AA seq
1604 aa
AA seq
DB search
MWVSWAPGLWLLGLWATFSHGANTGAQCPPSQQEGLKLEHSSSLPANVTGFNLIHRLSLM
KTSAIKKIRNPKGPLILRLGAAPVTQPTRRVFPRGLPEEFALVLTLLLKKHTHQKTWYLF
QVTDANGYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVA
SVHVDCSSASSQPLGPRRPMRPVGHVFLGLDAEQGKPVSFDLQQVHIYCDPELVLEEGCC
EILPAGCPPETSKARRDTQSNELIEINPQSEGKVYTRCFCLEEPQNSQVDAQLTGRISQK
AERGAKVHRETAADECPPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGND
CVRISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDG
RPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKG
SSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPAR
GDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGE
KGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGE
PGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGPKGEK
GDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQG
EPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGA
SVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSRGDLVFSGMPGAPGLWMGSS
WQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCV
QGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSP
GLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDK
GEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGPPGPPGPVGPRGER
GPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSP
GPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDC
GKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATG
ERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAG
EKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIK
RFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIG
REGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIP
GIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKTMKGPFG
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatcctgggctcctggcctgtggctgctcggtctttgggctaccttcagccat
ggggcaaatacaggtgcacaatgcccaccttcacagcaggaaggactcaaattggaacac
agtagtagcctgccagccaacgtgactggcttcaacctcatccaccgactcagcctcatg
aagacgtctgctatcaagaagatccgcaaccccaaggggcctctcatcctgcgcctgggg
gcggcccccgtgacccagcccacgcgacgagtattccctcggggtctcccggaggagttt
gccctggtgctgacactactgctgaagaaacacacccaccagaagacgtggtatctgttt
caagtgactgatgcaaatgggtatccacagatatccctggaagtcaacagccaagagcgg
agcctggagctcagggcccagggccaggatggcgactttgtgtcctgcatcttcccagtg
ccccagctcttcgacttgcgttggcacaagctgatgctgagtgtggctggacgtgtggcc
tctgtgcacgtggactgcagctcagcctcctcccagcctctggggccccgacgacccatg
aggcctgtgggccatgtatttctaggcttggatgctgagcagggcaagcctgtctcgttt
gaccttcagcaggtgcacatctactgtgacccggagctcgtgctggaggagggctgctgt
gagattttaccggcagggtgccccccagagacctccaaggcccgccgggacacccagagc
aatgagctcattgagatcaatccacagtctgaaggcaaggtctacacccgctgcttctgc
ctggaggagcctcaaaacagccaggtggatgcccagctgacgggaagaatcagccagaag
gcagaaaggggagcaaaggtccatcgggagacagcagccgatgagtgtccgccctgtgtc
catggtgcccgggacagcaatgtcacacttgctccctctggccccaagggagggaaaggt
gagcggggactgcctggtccaccaggctccaagggagagaagggagcacggggcaatgac
tgtgttcgaatctccccggatgccccgcttcagtgtgcagaaggcccgaagggagagaag
ggggagtcaggagctctgggaccctcaggactcccaggctcaacaggcgagaagggccag
aaaggcgagaagggcgacggaggcatcaagggcgtgccgggaaagccaggccgggacggc
cggccaggagagatctgtgtcattgggcccaaagggcagaagggagaccctggctttgtt
gggcctgaggggctggcaggagagcctgggccccccggcctccctggaccccctgggata
ggactgcctgggaccccgggggatccaggtggcccaccaggccccaagggagacaagggc
agctcagggatcccaggaaaggaaggccctggtgggaaacctgggaagccaggtgtgaag
ggagagaagggtgacccctgtgaagtgtgcccaacactgcctgaagggttccagaacttt
gttggacttcctggaaagccagggcccaaaggggagcctggtgatcctgtaccagcgagg
ggagaccctggcatccaaggcatcaaaggagagaagggggagccctgcttgtcctgcagc
tcggttgtaggggcccagcatcttgtgtcctccacaggggccagtggagatgtgggttcc
cctggctttggtctgcctggccttccgggtagagctggggtgccagggctgaaaggagag
aagggtaacttcggggaggcagggccagctggcagtccggggccaccaggaccagtgggg
ccagcaggcatcaaaggggcgaagggggagccctgtgagccgtgcccagccctgtccaac
cttcaggatggggatgtccgtgtggtggccttgcctggcccatccggagagaagggggaa
cctgggcctccaggctttggcttgccaggaaaacagggcaaggctggagagcgtggactg
aaggggcagaagggtgatgctgggaatcctggagaccctggaacgccgggcaccacaggg
cggccaggactgtcaggagagcctggagttcggggccccgcggggccaaaaggagaaaag
ggtgatggctgcactgcctgccccagcctgcaggggacagtgaccgacatggcaggacgg
cctgggcagcccggccccaaaggagagcagggccccgaaggcgtgggccgacctggtaaa
cccggccaacccggtctaccaggagttcaagggcccccaggactgaagggcgtgcaggga
gagccagggcctccaggaaggggagtccagggaccccagggggagcctggagccccgggt
ttgcctggcattcagggacttccgggacctcggggaccacctggccccactggagagaag
ggtgcccagggatctccaggggtgaaaggagccaccggacccgtgggacctcctggggcc
agtgtctctgggcctccgggccgtgatgggcagcaaggacagacaggactcagagggaca
ccaggtgaaaaaggaccacgaggagagaagggtgagccaggggagtgctcctgcccctct
cgaggagacctcgtcttctctggcatgccgggtgctccgggactttggatgggcagctcc
tggcagccgggcccgcagggtccaccaggtattcccggaccaccaggcccccctggagta
cctgggctgcagggagtgcctggaaacaacggtttgccaggacagcctgggctcactgcg
gaactgggatccttaccaattgaacagcacctccttaagagtatctgcggggactgtgtc
caggggcagagggcccacccagggtacctcgtggagaagggagagaagggagaccagggc
atccctggtgtgccaggcctcgacaactgcgcccagtgctttttgtcactggagcgccca
agagctgaggaggcccggggtgacaacagtgagggagatcccggctgtgttgggagccca
ggcctacctggtcctccgggattgccaggccagagaggagaagagggtccgcctggcatg
aggggctccccgggtcctccaggccctatcggccccccaggttttcctggtgctgttggc
tcccccggattgcctggccttcaaggagagcgaggtctcacgggcctgactggagacaag
ggggagccgggtcctccagggcaaccaggttacccaggtgccacgggccccccaggactg
cctggcatcaagggggagcgtggctacaccgggtcagcgggagagaaaggagagccgggg
cccccaggatctgaaggccccccaggccccccaggcccagtgggtcccagaggagagcga
ggaccccaaggtaactccggtgagaagggcgaccagggatttcaaggccagccaggcttt
ccgggcccaccgggtccccctggattcccaggcaaagttggatcacctggcccacctggc
cctcaagcagagaagggcagcgaagggattcgaggcccatcaggcctgcctggctcccct
gggccaccgggacctcctgggattcagggccccgctggtctggatggtttggatgggaag
gacggcaagcctggcttgaggggggaccctggtcctgctggcccccctggactcatggga
ccaccgggctttaaggggaaaacaggacatcctggcctcccaggacctaagggtgactgt
ggcaaaccaggtccccctggcagcactggccggcctggcgcagagggtgaacctggtgcc
atgggaccccagggaagacccggtcccccgggacacgttgggccaccagggcctccaggc
cagccaggaccagctgggatctctgcagtgggtctgaaaggagaccgaggagccaccgga
gaaaggggccttgcaggcctcccaggccagcccggcccccctggacaccctggcccccca
ggcgaacctggtacggatggtgcagctggcaaagagggaccccctggaaagcagggattc
tatggacctcctggtcccaagggtgatccaggagctgcaggacagaagggccaggcagga
gagaaggggagagctggcatgcctggtggacctggcaagagtggttccatggggcctgtt
gggccaccaggccctgcaggagagagaggccaccctggagctccggggccttcggggagc
cctggcttgcctggtgtgcctggctccatgggagacatggtgaattatgatgaaatcaag
aggttcatcagacaagagatcattaaaatgtttgatgagagaatggcttactacacctcc
aggatgcagttccccatggagatggcggcagctccgggacgaccagggcctccagggaag
gatggtgctccgggcaggccaggtgctccagggtcacctgggctccctggtcagattggc
agagaaggacggcagggcttgccaggagtaagaggactgcctggtaccaaaggtgaaaaa
ggggacattggtattggcattgcaggagaaaatggtcttcccggccccccaggtcctcaa
ggtcctccaggctatggcaagatgggtgcaacaggaccaatgggccagcaaggcatccct
ggcatccctgggcccccaggtccgatgggccagccaggcaaggctggccactgtaacccc
tctgactgctttggggccatgccgatggagcagcagtacccacccatgaaaaccatgaag
gggccttttggctga
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