Gorilla gorilla gorilla (western lowland gorilla): 101151938
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Entry
101151938 CDS
T02442
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101151938 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggo04147
]
101151938 (COL18A1)
00535 Proteoglycans [BR:
ggo00535
]
101151938 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
ggo00536
]
101151938 (COL18A1)
Exosome [BR:
ggo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101151938 (COL18A1)
Proteoglycans [BR:
ggo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101151938 (COL18A1)
Glycosaminoglycan binding proteins [BR:
ggo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101151938 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
DUF959
Collagen_trimer
Collagen
Fz
Motif
Other DBs
NCBI-GeneID:
101151938
NCBI-ProteinID:
XP_030860999
LinkDB
All DBs
Position
21:31444701..31503520
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AA seq
1016 aa
AA seq
DB search
MAPYPCGCHILLLLFCCLAAARANLLNLNWLWFNNEDTSHAATTIPEPQGPLPVQPTADT
TPADTHVTPQNGSTEPATAPGSPEPPSELLEDSQDTPTSAESLDAPEENIAGVGAEILNV
AKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPSRGIPSS
LGAHTTKAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSGRASLSSLLGGAPPWGSLQDPD
SQGLSPAAAAPSQQLQRPDVRLRAPLLHPLVTGSLGKHAAPSAFSSGLPGALSQVAVTTL
IRDSSAWVSHVANSVRPGLANNSALLGADPEAPAGRCLPLPPSLPVCGRLGISRFWLPNH
LHHESGEQVRAGARAWGGLLRTHCHPFLAWFFCLLLAPPCGSVPPPAPPPCRQFCEALQD
ACWSRLGGGRLPVACASLPTQEDGYCVFIGPAAVGRAGPGVGLRQAPCGKVSGNDQCPAV
PTPCAPPQGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAE
SSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGE
RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPHGPQGPPGIGYEGRQGP
PGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQV
HEVPEGWLLFVAEQEELYVRVRNGFRKVQLEARTPLPRGTDNEVAALQPPMVQLHDSNPY
PRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHTHRDFQ
PVLHLVALNSPLSGSMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRA
ALPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDILRHPTWPQKSVWHGSDPNG
RRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggctccctacccctgtggctgccacatcctgctgctgctcttctgctgcctggcggct
gcccgggccaacctgctgaacctgaactggctttggttcaataatgaggacaccagccac
gcagctaccacgatccctgagccccaggggcccctgcctgtgcagcccacagcagatacc
accccagcagatacacacgtgaccccccagaatggttccacagagccagcgacagcccct
ggcagccctgagccaccctcagagcttctggaagacagccaggacacccccacttctgcc
gagagcctggacgcgccagaggagaacattgccggtgtcggagccgagatcctgaacgtg
gccaaaggcatccggagcttcgtccagctgtggaatgacactgtccccactgagagcttg
gccagggcggaaacgctggtcctcgagactcccgtgggcccccttgccctcgctgggcct
tccagcaccccccaggagaatgggaccactctctggcccagccgtggcattcctagctct
ctgggcgcccacacaaccaaggctggcaccttgcctgcacccaccccatcgcctccctcc
ctgggcaggccctgggcaccactcacggggccctcagtgccaccaccgtcttcaggtaga
gcttctctctcctccttgctgggcggggcccctccctggggaagcctgcaggacccagac
agccaaggactctcgcccgctgcagccgctcccagccagcagctccaacgccctgacgtc
cgcctgcgcgcgccacttctgcaccccctggtgacgggctccctgggcaagcacgcggcc
ccctccgccttctcctctgggctcccgggcgcactgtctcaggtcgcagtcaccacttta
atcagggacagcagtgcttgggtctcccacgtggctaactctgtgcggccgggtctcgct
aataactctgccctgctcggggctgaccccgaggcccccgccggtcgctgcctgcccctg
ccgccctccctgccagtctgcggccgcctgggcatctcacgcttctggctgcccaaccac
ctccaccacgagagcggcgagcaggtgcgggccggggcacgggcgtgggggggcctgctg
cggacgcactgccaccccttcctcgcctggttcttctgcctgctgctggcccccccatgc
ggcagcgtcccgccgcccgccccgccaccctgccgccagttctgcgaggccctgcaggat
gcgtgttggagccgcctgggcgggggccggctgcccgtcgcctgtgcctcgctcccgacc
caggaggacgggtactgtgtgttcattgggccggctgcagtgggccgggccgggcctggc
gtggggctacggcaggcaccctgcgggaaggtgtctggtaatgatcagtgcccagcagtc
cccaccccctgtgctccgccccagggtcgccccgggatgaacggattgaaaggagagaaa
ggggagccgggagatgccagccttggatttggcatgaggggaatgcctggccccccaggg
cctccagggcccccaggccctccagggactcctgtttacgacagcaatgtgtttgctgag
tccagccgccccgggcctccaggattgccagggaatcagggccctccaggacccaagggc
gccaaaggagaagtgggcccccccggaccaccagggcagtttccgtttgactttcttcag
ttggaggctgaaatgaagggggagaagggagaccgaggtgatgcaggacagaaaggcgaa
aggggggagcccgggggcggcggtttcttcggctccagcctgccaggcccccccggcccc
ccaggcccacgtggctaccccgggattccaggtcccaagggagagagcatccggggccag
cccggcccacatggacctcagggaccccccggcatcggctacgaggggcgccagggccct
cccggccccccaggcccccccggccccccagggcccccttcatttcctggccctcacagg
cagactatcagcgttcccggccctccgggcccccctgggccccctgggccccctggaacc
atgggcgcctcctcaggggtgaggctctgggctacgcgccaggccatgctgggccaggtg
cacgaggttcccgagggctggctcctcttcgtggccgagcaggaggagctctacgtccgc
gtgcggaacgggttccggaaggtccagctggaggcccggacaccactcccacgagggacg
gacaatgaagtggccgccttgcagccccccatggtgcagctgcacgacagcaacccctac
ccgcggcgggagcacccgcaccccaccgcgcggccctggcgggcagatgacatcctggct
agcccccctcgcctgcccgagccccagccctaccccggagccccacaccacagctcctac
gtgcacctgcggccggcgcgacccacaagcccacccgcccacacccaccgcgacttccag
cctgtgctccacctggttgcgctcaacagccccctgtcaggcagcatgcggggcatccgc
ggggccgacttccagtgcttccagcaggcgcgggccgtggggctggcgggcaccttccgc
gccttcctgtcctcgcgcctgcaggacctgtacagcatcgtgcgccgtgccgaccgcgcg
gccttgcccatcgtcaacctcaaggacgagctgctgtttcccagctgggaggctctgttc
tcaggctctgagggtccgctgaagcccggggcacgcatcttctcctttgatggcaaggac
atcctgaggcaccccacctggccccagaagagcgtgtggcatggctcggaccccaacggg
cgcaggctgaccgagagctactgtgagacgtggcggacggaggctccctcggccacgggc
caggcctcctcgctgctggggggcaggctcctggggcagagtgccgcgagctgccatcac
gcctacatcgtgctctgcattgagaacagcttcatgactgcctccaagtag
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