Gossypium hirsutum (upland cotton): 107886334 Help Entry 107886334         CDS       T04793                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03013   Nucleocytoplasmic transport ghi03040   Spliceosome Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107886334   09122 Translation    03013 Nucleocytoplasmic transport     107886334  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ghi03019]     107886334    03041 Spliceosome [BR:ghi03041]     107886334 Messenger RNA biogenesis [BR:ghi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      107886334 Spliceosome [BR:ghi03041]  Complex C   Other components    EJC/TREX     107886334  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     107886334 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 LIM_bind Motif Other DBs NCBI-GeneID:  107886334 NCBI-ProteinID:  XP_040954998 LinkDB All DBs Position A03:complement(73794259..73815012) Genome browser AA seq 1844 aa AA seqDB search MSLPPIECIYVTEEIIRESKNGNSNFSFSSPVPMLRFLYELSWAMVRGELPFQKCKAVLD AVEFTERVSEDEFASCFADIVTQMAQDFTMAGECRINLIKLAKWLVESSLVPLRLFQERS EEEFLSEAEMIKIKAPDLKVKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRGSEDS TQNSSTARIGIIKSLIGHFDLDPNRVFDIVLECYELQPDNNAFLQLIPIFPKSHASQILG FKFQFYRRMEVNTPTPFGLYKLTALLVKEEFIDLDSIYAHLLPKDDEALEHYNGFSAKRL DEANKIGKINLAAIGKDLMEDEKQGDVRIDLFAALDMENEAVAERSPELENSQTLGLLTG FLLVDDWYHAHILFDRLSPLNPVAHVRICKGLFRLIEKSISSAYDIVRQTHLQSFVSPLG IDNVDTRGTMVSNSFIDLPKELFQMLATVGPHLYRDTLLLQKVCRVLRSYYLSALELVTN ADGASNGEMVTTGHRNPRLHLKEARSRVEETLGACLLPSLQLVPANPAVGQEIWEVMNLL PYEVRYRLYGEWEKDDERNPTILAARHTAKLDTRRILKRLAKENLKQLGRMVAKLAHANP MTVLRTIVHQIEAYKDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGRDKLKDDGLNLS DWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQFTENL TEEQLDAMAGSETLRYQATSFGATRNNKALIKSTNRLRDSLLPKDELKLAIPLLLLIAQH RSLVVINADAPYIKMVSEQFDRCHGTLLQYVEFLCSAVTPAAAYAQLIPSLDDLVHMYHL DPEVAFLIYRPVMRLFKCQGSHDVFWPLDANGTADITVACSESESKDDSSRVILDLGPPR KPTMWSELLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRNVYESEIAKQHAALKA LEELPDNSSSAINKRKKDKERIQEALDRLISELHKHEENVASVRRRLTREKDRWLSSCPD TLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMI CCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFI KVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKND EREDLKVLATGVAAALAARKSSWVTDEEFGMGYLELKPVPPIASKSVAGNTVAAQNGSSV NVSQNEAAGGRAVALGTQQSDVNLVKDQVSRTKPDGRLERAENAPLGKSDLKTKGGTSAN GSDAALSVTLAASQAGTEKSHENQKQPDDSSNKLDKHAAKTPAKNSAESELKASSKRSVP VGSLTKTQKQDHGKDDGKSGKAVGRTSAISVNDRDVPSHTEGRQGGTTNVSSAITSNGKD DSSEAPDASRPSSRIVHSPKHDCSATASKSSDKVQKRTSPVEETDRLSKRRKGDVEVKDL DGEVRVSDRERSTDLRSADFDKPGTDEVTSYRTGDKPLDRSKDKGSERHDRDYRDRLERS EKSRADDILTEKSRDRSIERHGRERSVERSIDRNLDRLGDKAKDERSKDERSKVRYADTS IEKSHADDRFHGQSLPPPPPLPPHMVPQSVNATGRRDDDPDRRFGSTRHTQRLSPRHEEK ERRRSEENLLVSQDDGKRRREDDFRERKREEREGLSLKVEERERDRERDREKANVVKEDD VDATGAKRRKLKREHLPSEPGEYSPVAPPPPPLSIGMSQSYDGRERDRKGPMMQRGGYLE EPGMRIHGKEATGKMARREPDPLYDREWDDEKRQRPEQKRRHRK NT seq 5535 nt NT seq  +upstreamnt  +downstreamnt atgtctcttcctcctatagagtgtatatacgtgacagaggaaatcattcgcgagagcaaa aatggaaactctaacttctcattctcttcacctgttcccatgcttcgctttctctacgag ctctcctgggccatggtgcgcggggaattgccattccagaagtgtaaagcggtcttggat gccgtggagtttacggagagagtgtcggaggatgagtttgcctcctgctttgctgatatc gtcacgcaaatggctcaagactttacaatggccggagaatgccgcattaatttgataaaa ttggcaaagtggctggtggagtcttcattagttccattgaggcttttccaggagcggagc gaagaagagttcctatcagaggctgagatgatcaagataaaggctccagatttgaaggtt aaagaggtcagggtaaatacacgtcttctttatcagcaaacaaaatttaacctccttcga gaagagagtgagggctatgctaagctggttactctcctttgtcgaggttctgaagattca actcaaaattcatcaacagcaagaataggcatcatcaagtcattaattgggcattttgat ctggaccccaaccgtgtttttgacattgtattggagtgttatgaacttcaaccggataat aatgcttttttgcaattgattcccatctttccaaagtctcatgcttcacaaattctcggt tttaagtttcaattctatcggcgcatggaagtaaatactcctaccccatttgggctctat aagcttacagcattgctagtgaaggaagagtttattgatcttgatagcatctatgctcat ttacttcccaaggatgatgaggcacttgagcattataacggtttctctgcaaaacggctt gatgaggctaacaaaattggaaaaataaatcttgctgctattggtaaggatctcatggag gatgagaaacaaggagatgtaaggatagacctttttgctgctctagatatggaaaatgag gctgttgctgaaagatctccagagcttgagaatagtcaaactttaggcttacttactggc ttccttttggtagatgattggtaccatgcccatatcctctttgatcgcctttcacctctt aatccagtggcacatgttcgaatctgcaaggggttatttaggctcattgaaaagtcaatc tcttcagcatatgatattgttcgccagacacatctccaaagctttgtgtctcccttgggt attgataacgtggatacaagaggtacaatggttagtaactcctttattgatcttcctaag gaactctttcagatgctggctactgttggacctcatctttaccgtgatacactactgttg cagaaggtatgtagagttttgagaagttattatttatctgcccttgagcttgtaactaat gctgatggagcctcaaatggggaaatggttaccactggacatcgaaatcctcgtcttcac ttgaaggaagctagatcaagggtagaggaaactttaggagcatgtctacttccttctttg caacttgtacctgcaaatccagctgttgggcaagagatttgggaagtaatgaatctcctt ccctatgaggtgcgatatcggttatatggcgagtgggaaaaggatgatgaacggaatcct acaatattagctgcaagacatactgccaagctggacacaaggaggattttgaaacggttg gctaaggaaaatttgaagcagttaggtcggatggttgcaaaacttgctcatgctaatcca atgactgtactgcgtaccattgttcaccagattgaagcatacaaggatatgattactcct gttgttgatgcattcaagtatttgactcagcttgagtatgacattttggaatatgttgtg attgaacgacttgcacaaggaggacgagataaactaaaggatgatggtctaaatttgtca gattggcttcaatctttggcatcattttggggacacctgtgtaagaaatacccatcaatg gaactgagaggtcttttccagtacctggttaatcagttaaaaaagggccaaggaattgaa cttgttctcctgcaggagcttattcaacaaatggcaaatgtacaattcacagaaaatctg accgaggagcagttggatgccatggctggaagtgagactcttcgatatcaagccacttca tttggtgcaactcgaaataataaggcattgatcaaatccaccaataggctcagagattcg ttgcttccaaaggatgaacttaagttggctattccacttttgttgcttatagcgcaacat cgttctttggttgtcataaatgcagatgctccttacattaagatggtcagtgagcagttt gacagatgccatgggactcttcttcagtatgtagaattcctatgtagtgcagtgacacca gctgctgcttatgctcaattaattccctcacttgatgatcttgttcatatgtaccacctt gatcctgaggttgcatttttgatatatcgtcctgtgatgaggctcttcaagtgtcaaggc agtcatgatgttttctggcctttagatgccaatggaactgcagatattactgtggcatgc tcagagtctgaaagtaaggatgattctagccgagtgatactggacttgggtcctcctcgg aagcccacaatgtggtctgaacttcttgacactgttaaaaccatgttgccttctaaagcc tggaatagtctctctcctgacctctatgccactttttgggggcttacactgtatgatctt tatgttcctagaaatgtttatgagtctgaaattgcaaagcagcatgctgctcttaaggct cttgaagagcttcccgataattctagttcagcaattaacaaaaggaaaaaagacaaggaa agaattcaagaagccttagatcgtctaattagtgaacttcataagcacgaggaaaatgtt gcatctgtccgtaggcgacttactcgtgaaaaagacaggtggttgagttcctgccctgat actcttaagattaacatggagttcctccagcgttgtatatttcctcgatgtaccttcagc atgccagatgcggtctattgtgcaatgtttgtccatactctccattccctgggcacacct tttttcaacacagtgaatcatattgatgttctgatatgcaaaaccttgcaacccatgata tgctgttgcaccgagtatgaagcaggaagactagggaggtttctgtatgaaacactaaag attgcatactactggaagagtgacgaatccatctatgagcgggagtgtggaaatatgcca ggctttgctgtgtattatagatatccaaatagccagcgtgttacatatggacagttcata aaggtacattggaaatggagccaaagaatcacaaggttattgatccaatgtttggaatca accgagtacatggagattcgtaatgctttaataatgctgacaaaaatttcaagtgttttc cctgttaccagaaagagtgggattaacctagaaaaaagggttgctaaaattaaaaatgat gaaagagaggatctcaaggtgttggcaacaggtgttgctgctgctttggctgctagaaag tcttcatgggttactgacgaggaatttggaatgggatatcttgagctgaagcctgtacca ccaattgcttcaaaatctgttgctggtaacacagttgctgcacagaatggttcatcagtt aatgtttcccagaatgaggctgctggtggcagggcagttgcccttggaacccaacagtcg gatgtgaatttggtcaaggaccaggtttcaagaacaaaacctgatgggcgattggaaaga gcagaaaatgcccctcttggtaaatctgatttgaaaacaaaaggtggtacatcagccaat ggctctgatgctgcgttatctgttacattagctgcttcacaagctggaacagaaaaatca catgaaaatcagaaacagccagatgattcttctaataaattggataagcatgcagctaaa actcctgcgaaaaactctgctgaatcagagttaaaggcctcttccaaacgctctgtccct gttggatctctaacaaagacacagaagcaagatcatggaaaagatgatggcaagtcgggg aaagctgttggaagaacttctgcaatctctgtcaatgatagagatgttccctctcataca gagggtagacaaggtgggactacaaatgtttcttcagctatcacttccaatgggaaagat gatagctctgaagcaccagatgcatcaaggccatcttctcgaattgttcattctcccaag catgattgttctgctactgcttctaagtccagtgataaggtgcaaaagagaactagtcct gtggaagagactgacagattaagtaagcgccgtaaaggggatgttgaagtgaaagatctg gatggtgaagttcgagtatctgacagggagaggtccactgaccttcgatcagcagatttt gataagcctggaactgatgaagtaacaagctacaggactggggataagcctttggataga tcaaaagataagggaagtgagagacatgatagggattacagagatagattggagcgctct gaaaagtcccgggcagatgatattttgactgagaagtcaagagatagatcaatagagaga cacggaagagagcgttctgttgagagaagcattgataggaatttggatagacttggtgat aaagctaaggatgagcgcagcaaagacgaaagaagtaaagtacgatatgctgatacatcc atagaaaagtctcatgctgatgaccggtttcatgggcaaagcttgccgccaccaccacct ttacctcctcatatggtcccacaatctgttaatgctactggtagaagggatgatgatcct gacagaaggtttggtagtacaagacacactcaaagactctctccaagacatgaagagaag gagcggagacggtcagaagaaaatttgttggtttcccaggatgatggaaagcgcagaaga gaggatgactttcgagagagaaagcgagaggaaagagagggattgtcattgaaggtggaa gagagggaaagagacagagagagggacagagagaaagcaaatgttgtgaaagaggatgat gttgatgctactggtgccaaaaggcggaaactcaagagagagcatttgccatcagagccc ggggaatattctccagttgcccctcctcccccacctctctccattggtatgtcacaatca tatgatggaagagagagagaccgaaagggtcccatgatgcagcgtgggggttacttggaa gaaccagggatgaggattcatgggaaagaggcaaccggcaagatggctcgtcgagaacca gacccattgtatgatcgggaatgggacgatgagaaaagacagagacctgagcagaagcgg aggcatcggaagtaa

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