Gossypium hirsutum (upland cotton): 107886664
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Entry
107886664 CDS
T04793
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107886664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107886664
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 related factors
107886664
Complex B
107886664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
DUF5955
Motif
Other DBs
NCBI-GeneID:
107886664
NCBI-ProteinID:
XP_016666197
UniProt:
A0A1U8HJE7
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All DBs
Position
A03:99407165..99413245
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AA seq
936 aa
AA seq
DB search
MAESPSSPAALDTTNSQSKPGSDNPNPLPTQPDPSPSSTVSTQLQPNPNPSAPPVSPQPP
PAVPSYSTPPPPISGAATAVPPAPPSFRPVPQFSPLPNFQPPGLQPPGVSSAPGSIPPPL
MQYQVPAGQVPNPALRPFAPIPNGYAALPGAVPPGTMPPPGLLRYPSPYPAMIRPAFPPR
PPGAIGVMPTVSRPPVPGARPIIPPVIRPAVPNVTPTEKPQTTVYIGKIAPTVDNDFMLS
LLHLCGPVKSWKRPSNGTPKAFGLCDFESAEGVLRAVRLLSKFNIDGQELVVNVSQATKE
YLEKYVEKKTENAKKLNEPPSAESEKEGENAVGDVKNESSTTSVEDPKKNSDSANKENIM
DIANSGIVTDEDREADRDASEKLAGMIEERLKTNPLPPPPPQTAPDGSGKSNSDLPVKSR
DGNSDIDLMRNDGAEGKIDDETTSESKATTENDRPETSSPDRRYDRSRDREQDLKRDKER
EIERLERETERERMRKEREQRRKIEEAEREYEKFLRDWEQRERDKEKQRQYEKEREKERE
RKRKKEIRYDEEDDDDEDSRKRLRRSVLEEKRRKRLREKEDDLADRLKEEKEIAEAKKRA
EEEQLQLQQQRDALKLLSGCFANGAAKNVLAEEPSTESKDKAVEQHYEHESSHENQISGD
GNMQNGSVDESNVAFVSASDTRQSGNAPRKLGFGLVGSGKRTTVPSVFHEEEDDDAQKEK
KMRPLVPIDYSTEELQAVQPGAPAPNLVAAAEFAKRISNVNPKEEKSDAERERSRRSYDK
SSRDKDRNDEDSRSRGESKEKIPDRDRDREHGQDKVKTTDNQKLLDAKQLIDMIPKTKEE
LFSYEINWNVYDQHALHERMRPWISKKIMEFLGEEEKTLVDYIVSGTQEHVKASQMLELL
QSILDEEAEMFVLKMWRMLIFEIKKVETGLALRSRS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatctccctcgtctccagcagccctagacaccaccaattcccaatctaaaccc
ggttccgataatccgaatccactaccaacccaacccgatccatctccttcctctaccgta
tcaacacagctccaaccaaaccctaaccctagcgccccaccggtatctcctcaacctcct
cccgccgttccttcctactcgactcctccaccgccgatctccggagctgccacagccgtt
cccccggcgcctccttcgttccgtccagtcccgcagttttcgccgttaccgaattttcaa
cctcctggcttgcagccgcccggcgtgagttcggctcctggttctattccgccgccgttg
atgcagtaccaggtgcctgcaggtcaggttccgaatcctgctcttagaccgtttgctccg
attccaaatggatatgcagcgctaccgggagctgttcctccgggcaccatgcctcctccg
ggacttctccgctatccctctccttacccagcaatgattcggcctgcattccctccacgc
ccacctggagctattggtgtgatgccaacagtttcacggcctcctgttcctggtgctcgc
ccaattattcctcctgtcattagaccagctgttcctaatgttactccaacagagaaacca
caaacgacagtttatattggcaagatagcaccaacagtggacaacgacttcatgctgtct
ctccttcatctttgtggacctgtcaagagttggaaacgcccctctaatgggacaccaaaa
gcatttgggctttgtgattttgagtctgctgaaggggttcttcgtgcagtgcgcctactt
agcaaatttaatattgacggacaagaattagtggtaaacgttagtcaagcaacaaaggaa
tatctggagaagtatgttgaaaagaaaactgaaaacgcaaagaaactaaatgaacctcca
tctgcagagtctgagaaagaaggtgaaaatgcagtaggtgatgtgaagaatgaatcttca
acaacttctgttgaggatccaaagaagaacagtgacagtgccaacaaagaaaatatcatg
gacattgccaactctggcattgtcactgatgaagaccgtgaggctgatcgagatgcttca
gaaaagcttgctggcatgattgaggaaaggttaaagaccaatcctctcccaccaccacct
ccacaaactgctcctgatggttctgggaaatcaaattcagatttgcctgttaaatcaagg
gatgggaactctgatattgatttaatgagaaatgatggagctgaaggtaaaattgatgat
gagactaccagtgagagcaaagcgacaactgaaaatgatcgacctgagacaagctcacct
gatcgtagatatgataggagtagagacagagagcaagatcttaagagggacaaggagcgt
gaaattgaaagattagaaagagaaacagagcgtgaaaggatgagaaaagagagggaacag
agaaggaagattgaggaggcagagcgtgagtatgaaaaatttcttagagattgggagcaa
agagaaagggacaaggagaagcagagacagtatgagaaggaaagggagaaagagagggaa
cgcaaacgaaagaaggagattcgctatgatgaagaagatgatgacgatgaagattcaaga
aaaaggctgcgtaggagtgttttggaggaaaagaggaggaagagattgcgggagaaggag
gatgacttggctgatagactcaaagaagagaaagaaattgctgaggccaagaaaagggca
gaggaggagcagctgcaactgcagcagcagcgagatgcattaaagcttttgtctggttgc
tttgcaaatggagctgcaaagaatgtgttggctgaagaacctagcaccgaaagcaaagat
aaggcagttgaacagcattatgagcacgaatcaagtcatgaaaaccagatatctggtgat
gggaatatgcaaaatggttctgttgatgaatcaaatgtggcctttgtttctgcatcagat
acacggcagagtgggaatgcaccaaggaagttaggttttggtctagttggatctggaaag
cggactactgtcccatctgttttccatgaggaggaagatgatgatgcacagaaggagaag
aaaatgaggcccctggttcccattgattactctactgaggaactgcaggctgtccaacct
ggcgcaccagcaccaaatctggttgcagctgctgaatttgcaaagcgaatatcaaatgtt
aaccctaaagaggaaaagtctgatgcagaaagagagcgaagcagacgttcttatgataaa
tctagtagggataaagatcgtaatgatgaggacagtcgcagcagaggtgagagcaaagag
aagatccctgatcgggatagagacagggaacatggacaggataaggtgaaaacaacagat
aaccagaagcttttggatgccaaacaactaatcgatatgattcctaagaccaaggaggaa
ctattctcatacgagataaactggaatgtgtatgatcagcatgcattgcatgagagaatg
agaccctggatctcaaagaaaattatggagtttttgggagaagaagagaaaacactggtt
gattacatcgtgtcgggtactcaggaacatgttaaggcttcccaaatgctggagctgctg
cagtctatattagatgaagaagcggagatgtttgtgcttaagatgtggaggatgctgata
tttgagattaaaaaagtagaaactggcctggctttgcggtcgagatcctga
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