Gossypium hirsutum (upland cotton): 107887061
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Entry
107887061 CDS
T04793
Name
(RefSeq) G patch domain-containing protein TGH isoform X1
KO
K13123
G patch domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107887061
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Complex C specific factors
107887061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1604
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
107887061
NCBI-ProteinID:
XP_016666679
UniProt:
A0A1U8HTJ6
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All DBs
Position
A03:complement(23312699..23323030)
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AA seq
1002 aa
AA seq
DB search
MDSDEEDYVFLGTPIEREEEITSRRKKAAAEASGNLRSLPPWKQEVRDEEGRRRFHGAFT
GGFSAGYFNTVGTKEGWAPQSFTSSRKNRAEVKQQSIFNFLDEDEKAELEGTLGTSSQFD
TFGFTAAEFARKQADKEQKQRPSAIPGPVPDELVLPASESIGVKLLLKMGWRHGRAIKDS
RASSLYDAHKEARKAFLAFASEDVKAPYPANEPDEEPESFMAQPVDNDTQSSKSLPAFVC
NPKQDLHGLGYDPFKHAPEFREKKRLHLSNDKQHGYRKAISIKDSLFGSKSGKAAPGFGI
GALEEYDAEDEDIYGAGYDFEETCVEEDEEPSKLSIESKQPSRLSIESKQKVVAKDEGVL
PGFKVASVSDYQLERFDPPIIPKDFIPHHKFPGPLETLKKLDVPSPPEVPPPDDSNLKLL
IEGVAKLVTRCGKLFEDLSRKKNQSNPLFSFLSGGDGHDYYEKRLWEEHQKLGDQAKLSL
DGKHSPSAQKMTAEGRGKLLGEKPLGRSSKETTSSSIASREFQLQFNLSDTFKKPDSFNK
LPEVAKPFKNDPAKQERFEQFLKEKYEGGLRSTGYSSASNMSEAARAREKLDFEAAAEVL
EKGKWGKESMVSTQSLDFLAAGMQFTSGGLEQVKDTHAEELVTKEKYPRREEFQWRPLPV
LCKRFDLIDPFMGKPPPAPRARSKIDSLLFIPDSVKDAKPEEDAITNRDVPAAQTGAQKT
IEAAEEEIEIVAENVERPVDLYKAIFSDDSDEDVEDTNTKKVEDPEKKIEVATTTLNRLI
AGDFLESLGKELGFEVPPDTPYSTNKANSSAQIETPNSDAGIAKVGTVEGHGTFCAPNVG
TGTSLNPEQETTQGSESPKNESIPGKPVRYSSKHTDGLSESISGKVNAEKFPPGDKKVRS
PSSRRRNWSSSSSSEDERSRKHSRRHRYRSSDSNNDSSSDDRERYHPRSKGKRKRSSREK
SSSSRKHSKHHKHRSRDSPSRSHHGSEREHSESRKEKRKRRN
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggattcggacgaggaggattacgtgttcctcggtacaccgatagagcgggaagaagag
atcaccagccgtcggaagaaagccgccgccgaagcttctggtaacctccgctccctccct
ccctggaagcaagaggttagagatgaagaaggacgcagaaggttccatggtgcatttaca
ggtggattttctgctggttacttcaatacggtgggcactaaagagggttgggccccacag
tcatttacatcatcaaggaagaacagagctgaagtcaaacagcagagcattttcaacttt
ttagatgaagatgagaaagcagaattggaaggtactttgggaacatcttcacagtttgac
acatttggatttacagctgctgagtttgctcgcaaacaagccgataaggagcaaaagcaa
aggccatctgcaattcctggacctgttcctgatgaacttgtcctgccggcctctgagtct
ataggtgtgaaattgctgctgaagatgggatggagacatggtcgtgcaatcaaggattct
cgtgctagttcattatatgatgctcataaagaagctagaaaagcttttctagcatttgct
tccgaggatgtgaaggcaccatatcctgctaatgagcctgatgaagaacctgaaagcttc
atggcgcagcctgttgacaatgatactcaatcttctaaaagcttacctgcttttgtgtgc
aaccctaagcaggatttacatggtttaggatatgatccattcaagcatgctcctgaattt
agggaaaagaagagattgcacctgtcgaatgataagcagcatgggtacaggaaagctata
tcaataaaagatagtctctttggttccaagtcaggaaaagctgctcctggatttggaatt
ggtgcacttgaagaatatgatgctgaagatgaggatatctatggtgctggttatgacttt
gaagaaacatgcgttgaagaggatgaagagccatcaaaattgagcatagagagtaaacaa
ccttcaaggttgagcatagagagtaaacaaaaggtggttgctaaagatgagggtgttctg
cctggtttcaaagttgcatcagtttctgactaccagttagaaaggtttgatcctcctata
atcccaaaggattttattccacaccacaaatttcctggacctcttgagacactgaagaag
ctcgatgttccctctcccccagaagttcctcctccagatgatagtaatctgaaactctta
attgagggggttgctaaattagtgactcgatgtggtaaattatttgaggatctctcaaga
aagaagaaccagtcaaatccattattcagttttctttctggaggagatggacatgattat
tacgaaaagagactgtgggaggagcatcagaaacttggtgatcaagccaagctgtcattg
gatggaaaacattccccaagtgcacagaagatgacggcagagggccgtggcaaattatta
ggagaaaaacctttgggaagaagctcaaaagagactacaagctcatcaatcgcatctagg
gagtttcaacttcagttcaatctttctgatacatttaaaaaacctgattcatttaataag
ttgcccgaagttgcaaaaccattcaaaaatgatcctgcaaagcaagaaagatttgagcag
tttctcaaggagaagtatgaaggagggcttcgttctactggttatagttcggcgagtaat
atgtcagaagctgctcgtgctcgtgaaaaattggattttgaggcagctgctgaggtacta
gagaaagggaaatggggaaaggaaagcatggtttcaacacagtcattggactttctagcg
gctggaatgcagtttacttctggcggactagagcaagttaaagatactcatgctgaagaa
ttggtgacaaaggaaaagtacccaagaagggaggagttccaatggcgacctttgcctgtt
ctatgcaagcgctttgatctcattgatccttttatggggaagccaccaccagctccacgt
gcgagaagtaagattgattctctacttttcattccagattctgttaaagatgctaaaccg
gaagaagatgctattacaaatagagacgttcctgctgctcaaactggcgctcaaaagaca
attgaagcagctgaagaggaaattgaaattgtagctgaaaatgttgaaaggcctgttgat
ctctataaggcaattttttctgatgattctgatgaagatgtagaagacacaaataccaaa
aaggtggaggatccggagaagaagattgaagtggcaactacaacactgaaccgtttgata
gcaggtgactttctagaatcactgggaaaagaactgggctttgaggttccccctgacaca
ccctactcaacaaataaagccaactcgtctgctcagatagaaacaccaaacagtgatgct
ggaattgcgaaagttggtactgttgaaggccatggaaccttctgtgctcctaatgttggc
actggaacttctctaaaccctgaacaagaaactactcaaggcagtgaatcccccaaaaat
gaatccattcctggcaagcctgtgagatatagtagcaaacatactgatggtttatctgag
agcatatctggtaaagtcaatgcagaaaagtttcctccaggggataagaaagtcagatca
ccctccagccgtcggagaaactggagcagcagctcctcatcagaagatgaaaggagtaga
aaacattctaggcgacatcgttatagaagcagtgattcaaataatgactcatccagcgat
gatcgtgaacgctaccatcccaggtcaaaaggaaaacggaaaagatcctccagggaaaag
agtagtagcagcagaaaacactcaaaacatcataagcacagaagcagggactctcccagc
aggtcccatcatggttcggagagagaacattcagaatccaggaaagagaaaagaaaacga
aggaattga
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