Gossypium hirsutum (upland cotton): 107888319
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Entry
107888319 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107888319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107888319
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107888319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
107888319
NCBI-ProteinID:
XP_016667876
UniProt:
A0A1U8HPE7
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All DBs
Position
D13:complement(58020762..58024915)
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AA seq
302 aa
AA seq
DB search
MGRSSRTLYVGNLPGDTRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDAEDA
IRGRDGYDFDGYYLRVELAHGGRRPSSSVDRHSSYSGSSSRGPSRRTDYRVLVTGLPSSA
SWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYI
RVKKYDSRYDSRRSYSRSRSPYSRSPSRSRSYSSRSRSRSRSRSKSPRARYTSQSPSVSR
SVSPCSHSVSPARSYSRSRSISRSPTPSPRSKHVSRTPPNRSPSWSRSRSLSRSRSPSVK
SD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcaagccgtacgctctatgtgggcaatctgcccggtgacacacgtttgaga
gaagtcgaagatttattttacaagtatgggcccattgttgatattgacttgaagatccca
ccaaggccacctggttatgcttttgttgagtttgaggatcctcgtgatgccgaagatgca
atccgtggtcgagatggctatgactttgatgggtattatttacgggttgaacttgctcat
ggtggtcgaaggccgtcatcatctgtggatcgccatagcagttacagtggtagcagtagc
cgtggaccttccagacgcactgactatcgtgttctggtgactggtttgccttcttctgcc
tcatggcaagacctaaaggatcacatgcgcaaagcgggggatgtttgtttctctcaagtg
tttcgtgatcgtggaggcatgacagggattgtagattacacaaattatgatgacatgaaa
tatgctataaggaagcttgatgactctgagtttcggaatgcttttagccgggcttacata
cgggtgaagaaatatgattcaagatatgattctaggcgcagctactctagaagtcgtagc
ccgtatagtcgaagccccagtcgtagccgcagttatagtagtaggagcaggagcaggagc
aggagcaggagcaagtctcctcgggcccgatacaccagtcagtctccatctgtatctaga
tcggtttcaccatgttcccattcagtgtcaccagcccgctcctattcaagatctcgctcc
atatccagatcaccaactccatctcctcgcagtaaacatgtaagcagaactccaccaaac
cgcagccctagctggagccggagtcgcagtttatctcgttctcgttcaccatcggtgaaa
tctgattga
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integrated database retrieval system
