Gossypium hirsutum (upland cotton): 107888426
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Entry
107888426 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107888426
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107888426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107888426
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107888426
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107888426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
107888426
NCBI-ProteinID:
XP_016668019
UniProt:
A0A1U8HXC4
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Position
D13:59352464..59356334
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AA seq
381 aa
AA seq
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MSGAPRLRSMNAPDSEARPVLGPAGNKAGSLSARKPASKPLRKVEKSPVEVTATEEKKSL
PSSIVSSLSPKKHSVSVPSVLRRHEKLLHSNLSLNASCSSDASTDSFHSRASTGRLIRSN
SVGSRRKPYASKPRSFVSDSGSDSPSDGSHQKKRCAWVTPNTDPSYATFHDEEWGVPVHD
DKKLFELLVLSGALSELTWPAILSKRQMFREVFMDFDPAAVSKLNEKKLIAPGSVSSSLL
SELKLRAIIENARQISKVIDEFGSFDEYIWSFVNHKPIISKFRYPRQVPVKTPKADVISK
DLVRRGFRSVGPTVIYSFMQVAGITNDHLTGCFRFQECITAAEGKEVEIKERAEEKKPDN
SVSVIESELSIAIDELSFSCE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgcaccgagattgaggtcaatgaatgcgcctgattccgaggcacggcctgta
ctgggaccggcagggaacaaggccggttcattgagtgcaagaaaaccagcttcaaagcct
ttgaggaaggttgaaaagtctccagttgaggtcactgcaacagaggagaaaaaatccctt
ccatcatctattgttagttcactttctccgaagaaacattctgtcagtgttccttcagtg
cttcgtcgccatgagaagttattacattctaatttatcactaaatgcttcatgttcatcg
gatgcttccacggattcatttcacagtcgagcatctactggtaggttaattcggtcaaat
agtgttggaagtaggaggaagccatacgcgtcaaagccaagaagctttgtttctgatagt
ggttcggattcgccatctgatggttcacatcagaaaaagagatgtgcgtgggtgacacca
aatacagatccaagttatgccactttccatgatgaagagtggggagttcctgtacatgat
gacaagaaattgtttgagctgcttgtactttcgggtgcattatctgaacttacatggcct
gctatcttaagcaaaaggcaaatgtttagggaagttttcatggattttgatcctgccgct
gtatcaaaattgaatgagaagaagttaatagcacctggtagcgtgtcaagttctttgtta
tcagaattaaagctccgagctattattgagaatgcacgccaaatatctaaggttatagat
gagtttgggtcatttgatgaatatatttggagttttgtgaaccacaagcctataataagc
aaattcagatatcctcgccaggttcctgttaaaaccccaaaagcagatgtcataagcaaa
gatctggtaagaaggggttttcgaagtgtggggccgacggtcatctactcgttcatgcaa
gtagcaggaataacaaacgaccatctcacgggctgtttcagattccaggagtgtataaca
gcagcagaaggaaaagaagttgagatcaaagagagggctgaagaaaaaaaacccgacaat
agtgttagtgtgatcgaatcagaattatccatagctatcgatgaattgagtttctcctgc
gaatga
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