Gossypium hirsutum (upland cotton): 107893435
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Entry
107893435 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107893435
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107893435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107893435
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107893435
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107893435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
107893435
NCBI-ProteinID:
XP_016673909
UniProt:
A0A1U8IDN2
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Position
A13:106004604..106008390
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AA seq
381 aa
AA seq
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MLGAPRLRSMNAPDSEARPVLGPAGNKAGSLSARKPASKPLRKVEKSPAEVTATEEKKSL
PSSIVSSLSPKKHSVSVPSVLRRHEKLLHSNLSLNASCSSDASTDSFHSRASTGRLIRSN
SVGSRRKPYASKPRSFVSDSGSDSPSDGSHQKKRCAWVTPNTDPSYATFHDEEWGVPVHD
DKKLFELLVLSGALSELTWPAILSKRQMFREVFMDFDPAAVSKLNEKKLIAPGSVSSSLL
SELKLRAIIENARQISKVIDEFGSFDEYIWSFVNHKPIISKFRYPRQVPVKTPKADVISK
DLVRRGFRSVGPTVIYSFMQVAGITNDHLTGCFRFQECTTAAEGKEVEIKERAEVKKPDN
SVSVIKSELSIAIDELSFSCE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtgcaccgagattgaggtcaatgaatgctcctgattccgaggcacggcctgta
ctgggaccggcagggaacaaggccggttcattgagtgcaagaaaaccagcttcaaagcct
ttgaggaaggttgaaaagtctccagctgaggtcactgcaacagaggagaaaaaatccctt
ccatcatctattgttagttcactttctccgaagaaacattctgtcagtgttccttcagtg
cttcgtcgccatgagaagttattacattctaatttatcactaaatgcttcatgctcatcg
gatgcttccacggattcatttcacagtcgagcatctactggtaggttaattcggtcaaat
agtgttggaagtaggaggaagccatatgcgtcaaagccaagaagctttgtttctgatagt
ggttcggattcgccatctgatggttcacatcagaaaaagagatgtgcgtgggtgacacca
aatacagatccaagttatgccactttccatgatgaagagtggggagttcctgtacatgat
gacaagaaattgtttgagctgcttgtactttcgggtgcattatctgaacttacatggcct
gctatcttaagcaaaaggcaaatgtttagggaagttttcatggattttgatcctgccgct
gtatcaaaattgaatgagaagaagttaatagcacctggtagcgtgtcaagttctttgtta
tcagaactaaagcttcgagctattattgagaatgcacgccaaatatctaaggttatagat
gagtttgggtcatttgatgaatatatttggagttttgtgaaccacaagcctataataagc
aaattcagatatcctcgccaggttcctgttaaaaccccaaaagcagatgtcataagcaaa
gatctggtaagaaggggttttcgaagtgtggggccaacggtcatctactcgttcatgcaa
gtagcaggaataacaaacgaccatctcacgggctgtttcagattccaggagtgtacaaca
gcagcagaaggaaaagaagttgagatcaaagagagggctgaagtaaaaaaacccgataat
agtgttagtgtgatcaaatcagaattatccatagctatcgatgaattgagtttctcctgc
gaatga
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