Gossypium hirsutum (upland cotton): 107893898
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Entry
107893898 CDS
T04793
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107893898
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ghi01001
]
107893898
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107893898
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107893898
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107893898
Protein kinases [BR:
ghi01001
]
Serine/threonine kinases: Other
ULK family [OT]
107893898
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
107893898
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107893898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kdo
YrbL-PhoP_reg
MAS20
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
107893898
NCBI-ProteinID:
XP_016674528
UniProt:
A0A1U8IDY2
LinkDB
All DBs
Position
A13:complement(42476842..42483863)
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AA seq
729 aa
AA seq
DB search
MAQATGRGRMVGNYLVGRKIGSGSFSIVWHARHRVHGTEVAIKEIVTGRLNKKLQDSLMS
EIFILKRINHPNIIRLHDIVEVPGKIHLVLEYCKGGDLSMCITHHGCVPEATAKHFMQQL
AAGLQVLRDNNLIHRDLKPQNLLLSTNDRNAVLKIADFGFARSLQPWGLAETLCGSPLYM
APEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNIVKSTELLFPVENNYL
TADCKDLCLKLLRRNPAERLTFQEFFNHPFLSQGQPNEPLRSQGILGNGYPFFESRPGST
DESFQEDCLPFFLDDDSSGPEGSPSFEKKRSSMKSGYGFSPNAKDTREQTSNPLNKVKFT
SKYSGTRHKLDDSSFRHESSKVSGETLYEPHKSMDQRSTSTHSRVGDTLELNDQDYVLVS
GPPMDVSFLASTSKPNHIPYKLESPPLIPFTSNTTSTAPVAIVGATNINVYHVGSLESQS
SAPGTSPGSIDVGDALEQPSSHCITRIKSLQQCASAITELVHEKTEAGKHLEAFSIQLVI
LAIWKQALHICHTQAASAMEGSPSQETSRLRSSTSKKLGTSDTEESPEDISSEIEREFLQ
EVEHAEELANVIEPGSTEMPDAMETIFQAALALGRRGGVSLPVTFISINNIYIVDELMGE
MESAVNLYSNAVCLLIFLLVEAPSLILNPPFSLTSSDRYRLRTYIDFLRNRQGCSRSQRM
ALLRSKDQA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagcaacggggaggggaagaatggtagggaactatttagtgggtcggaaaatc
gggtcgggttccttttcgattgtttggcatgcgaggcatcgagttcatggaaccgaggtg
gcgataaaggagatcgtaacgggtcgactcaataagaagttgcaagatagtttgatgtcg
gaaatctttattttgaagagaatcaatcatcctaatattattcgactgcatgatattgtt
gaggttcctggaaagatacatcttgtattggaatactgcaaggggggtgacctttctatg
tgtattacacatcatggatgtgtccctgaagcaactgcaaagcatttcatgcagcaacta
gcggctggcctacaagttctccgtgacaataatcttatacatcgtgatctaaagcctcag
aatcttcttctgtcaacaaacgaccgcaatgcggttttaaagattgcggactttggattt
gcaagatcgctgcaaccttgggggcttgctgaaacgttatgtggttcaccactttacatg
gctcctgagataatgcaactgcagaagtacgatgcaaaggcagatctctggagtgttggg
gctattttatttcagcttgttaccgggaaaactcctttcactgggaacaatcaaattcag
ttactccagaatattgtgaaatcaactgagttgcttttccctgtggaaaacaattatttg
actgctgattgcaaagatttatgtctaaaactgctgcgtcgtaatccagcggaacgttta
acatttcaagagttctttaatcacccatttctctctcagggccaaccaaatgaaccattg
aggagtcagggaattttaggaaatggttatccattttttgaaagcagacctggaagtact
gatgaaagctttcaggaggattgtcttcccttctttctggatgatgattctagtggtcct
gaagggagcccttcctttgaaaagaagaggtcctcaatgaaatctggttatggattttct
cccaatgcaaaagatactagagaacaaacttctaatcctttgaataaagtcaaatttaca
tccaaatacagtggtacaagacataaattagatgattccagttttagacatgaaagcagc
aaggtttctggtgaaactctgtatgaacctcacaaatccatggatcaaagatctacaagt
actcattcaagagttggggacacactggagttgaacgaccaagattatgttctcgtatct
ggacctcccatggatgtgtcatttttagctagcacttccaagccaaaccatattccatac
aaactggagagtccacccctgatcccctttaccagtaacaccacatcaacggctcctgtt
gcaattgttggtgcgaccaatattaatgtctatcatgtaggaagcttggaaagtcagagc
tctgctcctgggacttctccagggtccattgatgttggggatgctctggaacagccatca
tctcattgcatcacaaggataaagtcgttacagcagtgcgcatctgcaattacagagtta
gtgcatgagaagactgaggcaggtaagcatcttgaagcgttctcaatccagcttgtgatt
cttgcaatttggaagcaagcattgcatatatgtcatacacaggctgcatcagctatggaa
ggaagtccgagccaagagacaagcagactaaggagtagtaccagcaagaagcttggaacg
tctgatacagaagagtctccagaagatatatcctcggagatagagagggaatttctccag
gaagttgagcatgctgaggaacttgccaatgttattgagcctggaagtacagagatgcct
gatgcaatggagacgatattccaggctgcccttgctttgggaagacgtggaggagtgagt
cttcctgtcaccttcatatctatcaataatatatatattgttgatgagctcatgggcgaa
atggaaagtgcagtaaatttgtattcaaatgcagtgtgtttgttaatcttccttctagtt
gaagcaccatccctcattttgaaccctccattttccctcacaagctcagatcggtatagg
cttcgaacttacattgattttcttagaaacaggcaaggttgctcaagatctcagaggatg
gcacttctgaggagcaaggatcaggcatag
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