Gossypium hirsutum (upland cotton): 107894061
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Entry
107894061 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit A-like
KO
K03254
translation initiation factor 3 subunit A
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107894061
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-3
107894061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCI
Motif
Other DBs
NCBI-GeneID:
107894061
NCBI-ProteinID:
XP_040931035
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All DBs
Position
A08:complement(122176013..122182471)
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AA seq
941 aa
AA seq
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MANFAKPENALKRAEELINVGQKQDALQALHNLITSKRYRAWQKPLEKIMFKYVELCVDM
RKGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMHLSTQKAEQARSQAEALEEALDVDDLE
ADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYKDQRDRPDLSAPESLQLYLDTRFEQLKI
ATELGLWQEAFRSVEDIHGLMSIVKKTPKASLMVVYYAKLTEIFWISGSHLYHAYAWFKL
FSLQKSFNKNLSQKDLQLIASSVVLAALSVSPYNQTRGASHLELENEKERNLRMANLIGF
NLESKLENREVLSRSAVLAELVSKGVLSCATQEVKDLYHLLENDFXPLDVASKIHPLLMK
ISKLGGKLTSASSVAEVQLSQYVPSLERLATLRLLKQVSQLYQTMKIESLSQMIPFFEFS
MVEKISVDAVKHNFIAMKVDHMKGAVLFGNMGLESDKLQDHLAVLAESLNKARAMIYPTP
KKASKLGEVLPGLGEIVDKEHKRLLARKSIIEKIKEEQERQLLEMEREEESKRQNLLKKT
EEAEKKRLAAMFEQQRAERIRKEIEERELEEAQALLQETEKHLKRGKKKPILDGEKLTKQ
TLIERALSEQLKERQEQEKRLQKVAKTMDHLERAKREEAAPLIEAAFQRRLVEEKVLHER
EQQLEVELSRQRHDGDLKEKNRLARMLENKMIFQESVISRRQAEFDQRRVEREERIKQII
QARKQERDIKRKKIFYVRSEEERIKKMRKEEEACKREEAERRRKEEAEHKAKMDEIAEKQ
RQRERELEEKERLRREALLGRAPEGISRPSELPAGSRTTEPVVATPAAAAAAPTTGKYVP
KFRLRPESSGPAPPSEPDRWGKPAPLEPDRRAAGSRALHRI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattttgcgaaaccagagaatgccttgaagagagctgaagagttgattaatgtt
gggcagaagcaagatgctttgcaggctcttcacaatctaataacttcaaagagatacaga
gcttggcagaagccgcttgaaaagatcatgtttaaatatgtagagctgtgtgttgacatg
cggaaaggtcgttttgccaaggatggtctgattcaatatcgtatcgtatgtcaacaagta
aatgttagttctctggaggaggtgatcaagcacttcatgcatctttctacccagaaagct
gagcaggctcgaagccaggcagaagccttagaagaagctcttgatgttgatgaccttgaa
gctgataaaaggcctgaagatctaatgctaagctatgtcagtggagagaaaggaaaggag
aggtctgatcgtgagcttgttactccttggttcaagtttctctgggagacctatagaaca
gtgcttgaaatattgcggaacaattccaagttagaggcactctatgcgatgacagcacat
cgggcattccagttctgcaagcagtataaacggacaacagagttccgaaggttgtgtgag
attataaggaatcatttagcaaatctaaataaatataaagaccagagggacagacctgat
ctttcagcacctgaaagtttgcaactgtatcttgatacaagatttgagcagctaaagatt
gctactgaacttggactctggcaggaagcttttcgttctgttgaagatattcatggattg
atgtccattgtcaagaaaactcccaaggcttccttgatggtggtttattatgccaagtta
actgaaatattctggatttcaggcagccatctttatcatgcttatgcatggttcaagcta
ttttcacttcaaaaaagctttaataaaaacttaagtcagaaggacttgcagttgatagcg
tcatcagttgttttggctgcactgtcagtttccccttacaatcaaacacgtggtgcatca
cacttggaacttgaaaatgagaaagaacgcaaccttcgaatggcaaatcttataggattt
aatcttgaatctaaacttgagaacagagaagtgttgtcaaggtcagcagttcttgcagag
ctggtatccaaaggtgtacttagttgtgcaactcaagaagtgaaagatctttaccatctt
ttagaaaatgatttcntccctcttgatgttgcatctaagatacatcctttgttgatgaaa
atatcaaaactgggtgggaagctgacttcagcttcatctgttgccgaagttcaactctct
caatatgttccttctcttgaaaggcttgctaccctcagattgcttaagcaggtttcccaa
ctttaccagacaatgaaaattgagagtctgtctcagatgatccccttttttgaattttct
atggttgaaaagatttctgttgatgctgtgaaacataatttcatagccatgaaagttgac
cacatgaaaggtgctgtgctgtttggtaatatgggtcttgaatctgacaagcttcaagat
cacttggctgttcttgctgagtctttgaataaagcaagagcaatgatataccccactccg
aagaaagcatcaaagctgggtgaagttttaccagggttaggggaaattgtagacaaggaa
cacaaaagacttcttgcacggaaatcaatcattgagaaaataaaggaagaacaagagcgt
caactattggaaatggaacgtgaggaggagtcaaagaggcagaatttgctgaagaaaact
gaagaagcagaaaagaagaggcttgctgctatgtttgagcaacaacgagctgaaagaatt
cgtaaggaaatagaggagcgagagcttgaagaagcacaggcactactacaggaaactgaa
aagcatttgaaaagggggaaaaagaagccaattttggatggggagaaattaacaaagcaa
accttgatcgagcgggctttgagtgagcagctcaaggagaggcaggaacaggagaagaga
ctacaaaaggttgccaaaacaatggaccatctagaaagggcaaagagagaggaagcagcc
cccttgattgaagctgcttttcaacggcgattggtagaagagaaggtgcttcatgaacgt
gagcaacagctggaagttgagttgagcagacagcgccatgatggggacttgaaagagaag
aataggctggcacgtatgttagaaaacaagatgattttccaggagagtgtaataagtcgt
cggcaagctgagtttgaccaacggagagtggagagagaggagaggatcaaacaaataatt
caggctcggaagcaggaaagagatattaagagaaagaaaatattttatgtgaggtctgag
gaggagagaataaagaagatgcgcaaagaggaggaggcttgtaaacgtgaagaggctgag
agacgaaggaaagaagaagctgaacacaaagcaaaaatggatgagattgctgaaaagcag
aggcaaagagagcgagaattggaagagaaagagaggctgaggcgagaagctctcttggga
agggcaccagaggggatttctaggccttctgaacttcctgctgggtcccgtacaactgag
cctgtcgttgcgactccagctgctgctgctgctgctccaactaccgggaaatatgttcct
aagttccggctaaggcctgaaagctctggtccagctccaccttctgaacctgatcgatgg
ggcaagccagcaccgttggagcccgaccgacgggctgctggcagcagggctctccatcgc
atctga
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