Gossypium hirsutum (upland cotton): 107897639
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Entry
107897639 CDS
T04793
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28 isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107897639
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107897639
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107897639
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107897639
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107897639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
107897639
NCBI-ProteinID:
XP_016678645
UniProt:
A0A1U8IKK1
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All DBs
Position
A10:complement(23409013..23412493)
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AA seq
297 aa
AA seq
DB search
MGRYRSRSKSYSPRRRSRSPTRGRKRYDDEPRDRQQSHRDHRRRSPLPSGLLIRNLPLDA
RPEDLRVPFERYGPVKDVYLPKNYYTGEPRGFGFVKFRYGEDAAEAKQRMNHQVIGGREI
RIVFAEENRKTPQEMRLTARVSGRDRGSRRTPPRSPRRRYRSYSCSPSPAGHDSRDRDQR
GKDYHHSPRRSRSISQDRGMRDDYRSPSRSRSMSRDCGAKDDYRSPRRSRSVSRSLSPRS
PHGDRDREYRTKQRSPSPRENGQSLQDERDHVSSRSKSPRRVNRSPSRSRSRSLSPR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggggaggtatcggagccggagcaaaagctacagtcctcgtcgtcgtagccggagtccc
actcgtggaaggaagaggtacgacgatgaacctcgcgatcgccagcaatctcaccgtgac
caccgtcgccgctcccctctcccttctggtttgctcattcgcaatctccctctcgacgct
aggcctgaagatcttagggttccctttgaacggtatggtccggtgaaggacgtttatctg
ccaaaaaactattatacaggggaaccacggggctttggttttgtgaagtttcggtatggt
gaagatgctgctgaagcaaaacaacgaatgaaccatcaagttattggtggacgtgagata
agaattgtttttgctgaggagaatagaaagactccccaagaaatgcgtctgactgcccgt
gtaagtggtcgagataggggaagcaggagaacaccgcctaggtccccaagacgccgatat
cgctcttactcttgctcaccttcacctgctgggcatgattcaagagacagggatcagagg
gggaaagattatcaccactcccctaggcggtctagatcaatttctcaggatcgtggtatg
agagatgattatcgctctcccagtcggtccagatccatgtcaagggattgtggggcaaaa
gatgattatcgctctcccaggcgatctagatctgtttctcggtctctttctccacgttct
ccacatggtgacagggacagggaatacagaaccaagcagaggtcccctagtcctagggag
aatggtcagagtctacaagatgagagagatcatgtgagcagcaggtcaaagagcccaagg
cgtgtcaatcgcagtccttcaaggtctcgttcacgatctttgagtcctcgctag
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