Gossypium hirsutum (upland cotton): 107898725
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Entry
107898725 CDS
T04793
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1-like
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107898725
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
107898725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
LAIKA
BURAN
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
107898725
NCBI-ProteinID:
XP_016679730
UniProt:
A0A1U8INM6
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All DBs
Position
D04:complement(58119080..58128900)
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AA seq
1386 aa
AA seq
DB search
MYSSRGTNAYGQQPYVGQSGYAQNLGAGYSSSSVGGPDGGAQMSLSSRHSSILGSSQDTE
VGGYRALPSVSAHYGVQYSSIYGTSALSATQQVPAASSKGAGASALEARNAYASALPDSP
KYASTDYVSSASHSYSHKGDQMYAEKIPDYPTVERRQFGERQGSYLGRDLSSEPTGRYSD
SAFFGHQHQPDIYDRLDQAVLLRQEQLLKAQSASHDSSSRQADYLAARSAAGRHSAQDLL
SYGGRIDADPRSLSLLSSSSSYGGQTPSILGAAPRRNVDDMMYPPSSANPGYGVSLPPGR
DYGTKGLHVTTLETEYPGSTLSRSGLPRIDERKDDRAGYLREFEMREEERRREHLREREK
DRERERERERERERERLRERERERERLRILERREKEREREKERERERKRALEVTRARTPP
RVSRDHRGPSLTKEVRPVKRESPRREASHRRLSPVKEKRREYVSKVYTSNLIDVERGYLS
IDKRYPRLFVSPEFSKVVINWPKGNLKLSMHTHVSFEHDFIEDNLVESKELSSKLLPVEP
EKPEQGSTVWNAKMMLMSGLSRSALEELSSEKIPDDRIPHICNILRFAVLKKDHSFMAIG
GPCVSADGSNPTGDEFSLTQTALRYAQDVVNLDLQKCQHWNRFLEIHYDRVGKDGLFSHK
EVTVLFVPDLSECLPSLDEWRAQWLAHRKAVSERERQLSLKREKSKERKEGSKDKEADTT
KQTERGKSGKKILSMSSSDGVVANKKEKDGKCIEGDDSEGKANGGENKVLVKDGSEITVE
GGPEKKESGEAATAKTGVVKSVKKKIIKRIVKQKVANKTAAEVNTASKPSNKVEDAGEQN
TKSEIGSQPEESSAGSAGIKTFARKKVTKKEAVGKTDQDEDNDVPLEAKMEVETGCSGDK
PKDNSDATAAAVENATVKTTLKKKIIKRVPKRKVPATQAKDEVAEIKNDGGEDEKKVVLA
GTETSNIGKQTGSEKQGNAASSSKSESKPEKENKKDEKSTNTESLNDKKKVNTKYTCDVK
GAKLKEGEKPKDEKAEKDSKDESRSNTNKELKEKRKPDEPSLKHPGLILQTKWSKDSKLR
PLSLSLDSLLDYTDKDIEESTFELSLFAEVLYEMLQYQMGCRILTFLQKLRVRFITKRNQ
RKRQREEKSDKETEKTSPTKRSKSNELPVMKNESTKLDTSTATQQEDEMIVTKEETTTDQ
VEEPKMANEETNVDHVEEPKIKDEIEEEDPEEDPEEYEEMEDASQPNSSNEKNEEEKAQT
DAKPEKGSEKEAEKNEAVASTKSEITTKAASTDAGPEGDMSRKEQKVDPKKKVPAIDKDL
LQAFRFFDRNRVGYVRVEDMRLMIHSLGKFLSHRDVKELVQSALLESNTGRDDHILYDKL
VRMSDI
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgtccagagggacgaatgcctacgggcagcaaccttacgttggccaatccgga
tacgcccaaaatttgggtgctggttattctagtagttctgttggaggtcctgatggggga
gctcaaatgtccttgtcttctcggcattcatcaattttaggtagttctcaagatactgaa
gttggtggatacagagcccttccctcagtttcagctcattatggggtgcaatatagctcc
atatatggcacatctgctttgagtgctactcagcaggttcctgctgcaagttccaaaggg
gctggagcatcagctttggaagctcgtaatgcttatgcctcagctctgccagattcacca
aaatatgcatctactgactatgtttcatctgcaagtcacagttatagtcacaaaggtgac
caaatgtatgctgaaaagattcctgactatcctacagtggagagaagacaatttggagaa
cgacaaggtagttatctggggagggatttgtctagtgagccaactggaagatattctgat
tctgctttttttggtcatcagcatcagcctgacatatatgatcgtcttgatcaagctgtc
ttgcttcgacaagaacaattgctcaaagctcaatcagcctctcatgatagtagttcaaga
caagctgattatcttgcagcaaggagtgctgctggtcgacattccgcacaagaccttctg
tcttacggaggaagaatagatgccgatccccgcagtttatcattgcttagctcttcttct
tcttacggtggacaaactccttcgatattaggggcagctccaaggagaaacgttgatgat
atgatgtatccacctagttctgcaaatcctggttatggagtgagcctaccacctggtaga
gattatggaacaaagggacttcatgtgacaacccttgagactgaatatcctggtagcaca
ttgtcacgcagtggtcttcctaggattgatgaacgcaaggacgatagggctggttacctt
agggagtttgagatgagagaggaggagcgtcgtcgggagcatttgcgtgaaagagagaaa
gacagagagagggagagggagagggagagggagcgagaacgagaacgactacgagaacgg
gaacgtgaacgtgaacgtttgcgcatcttggagcgacgggagaaggaaagagagcgggag
aaggagagagaacgagagcgcaagcgtgcacttgaagttacacgtgcaagaactccgcca
agagtttctagggaccaccgaggtccatctttgacaaaagaggttcggcctgtgaagcga
gaatccccacgtcgtgaagcttcccataggcgcctttcacctgttaaagaaaaaaggaga
gaatatgtaagcaaggtatatacatccaacttgatagatgtagagagaggttatctgtcg
attgataagcgatatccaagactttttgtctctcctgaattttcgaaggttgttataaac
tggccaaaggggaaccttaaactctctatgcatactcatgtcagctttgagcatgatttc
attgaagataatttagttgaatccaaagaactttccagcaagcttttgcctgttgaacct
gaaaagccagaacaaggaagtacagtgtggaatgcaaagatgatgttgatgagtggatta
agcaggagtgctttggaagagctgtcatctgaaaaaatccctgatgaccgtatacctcat
atttgcaatattctaaggtttgctgttcttaaaaaggatcattctttcatggcaatcggt
ggaccttgtgtttctgctgatggcagcaatcctactggtgacgagttctctctaactcaa
acagcccttagatatgcgcaggatgtagttaatcttgatttacagaaatgtcagcattgg
aatcgtttccttgagatacattatgacagagttggaaaggatggactgtttagccataaa
gaggttaccgtactgtttgttccagatttatctgaatgtctcccttcacttgatgaatgg
cgagcccaatggttagctcatagaaaagctgtttctgagagagagcgccagctgtctttg
aaaagagagaaatcaaaggagaggaaagaaggatcaaaagacaaggaagcagatactaca
aagcaaactgaaagaggcaaatcaggaaaaaagattctgtccatgtcatctagtgatgga
gtagttgctaacaaaaaggagaaggatggcaaatgtattgaaggagatgattctgaagga
aaggctaatgggggcgaaaataaagttctggtaaaagatggcagtgaaataactgtggaa
ggaggtcctgagaaaaaggaaagtggagaagctgctactgctaagacgggcgttgtgaag
tccgtgaagaaaaagattataaagaggatcgtcaaacagaaggttgctaataagacagct
gcagaagtaaatactgctagcaaaccgagcaacaaggttgaagatgctggagagcagaat
actaaatcagagattggcagtcagccggaagaatcttctgctggtagcgcagggattaaa
acttttgcacggaagaaggttacaaaaaaggaggcagttggtaaaactgatcaggatgaa
gataatgatgttccccttgaggcaaagatggaggtagaaacgggatgctctggagataaa
ccaaaggataattctgatgccactgctgcagctgtagaaaatgccactgtgaaaacaact
ttaaagaagaaaattattaagagggtgcctaaaagaaaggttcctgctacacaagctaag
gatgaagtagctgaaattaagaatgatggtggcgaggatgagaaaaaggttgttttagct
ggaactgagacctcaaatataggtaagcaaacaggttcagaaaaacaaggtaatgctgca
agttcgagtaaatcagaatccaagcctgaaaaggagaataagaaggacgaaaagtcaacg
aacacggagtcactgaatgacaagaaaaaggttaacactaagtatacttgtgatgtcaag
ggggccaaattgaaagaaggggaaaagccaaaagatgagaaagcggaaaaagatagtaaa
gatgaatcccgaagtaatactaacaaagaattgaaagaaaagaggaagcctgacgagcct
tctctgaagcatcctggattgattctacaaacaaagtggagcaaggattctaaattgcgt
ccgttgtcactttcactggattcacttttggattatacagacaaggacattgaagaatcc
acatttgagctttcattatttgctgaggtgctttatgaaatgcttcagtatcaaatgggt
tgccgtattttaacatttctccagaaactgcgagtaagatttattacaaaaagaaatcag
cgtaagaggcaacgggaagaaaaatctgacaaggaaactgagaaaacatcgccaacgaaa
cgatcgaaaagcaatgagctccctgtgatgaaaaatgaatctactaagttggacacatca
actgcaactcagcaggaggatgaaatgattgtgaccaaggaagaaactaccacagatcaa
gttgaggagccaaagatggccaatgaagaaactaacgttgatcatgttgaggagccaaag
ataaaagatgaaatagaggaagaagatccagaggaagatcctgaagaatatgaagaaatg
gaggatgcaagtcaacccaattcctctaatgagaaaaatgaagaagagaaggcacaaaca
gatgctaagcctgaaaaggggtctgaaaaggaggctgagaagaatgaagctgtggcatct
accaaatctgaaataaccacaaaagctgctagtacagatgctgggcctgagggagatatg
tctagaaaggagcagaaagttgatcctaagaaaaaggtgcctgctattgataaggatttg
ttgcaggctttcaggttttttgaccggaatcgagttggctacgttagggtcgaagatatg
aggttgatgattcatagcttgggaaagtttctatctcatagggatgtcaaagaactagtg
caaagtgcattgttagagagcaacacaggaagggacgatcacattctttacgataagctg
gttcgtatgtctgacatataa
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