Gossypium hirsutum (upland cotton): 107899055
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Entry
107899055 CDS
T04793
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
ghi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107899055
09124 Replication and repair
03420 Nucleotide excision repair
107899055
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ghi01001
]
107899055
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107899055
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107899055
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107899055
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
107899055
2.7.11.23 [RNA-polymerase]-subunit kinase
107899055
Protein kinases [BR:
ghi01001
]
Serine/threonine kinases: CMGC group
CDK family
107899055
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107899055
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
107899055
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107899055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
107899055
NCBI-ProteinID:
XP_016680138
UniProt:
A0A1U8IUP6
LinkDB
All DBs
Position
A09:77930680..77939225
Genome browser
AA seq
410 aa
AA seq
DB search
MDPSKKVADRYLKREILGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK
LLKELKGPNIIALIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYIQMTLKG
LAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELL
FGTKQYAAGVDVWAAACIFAELLLRRPFLQGTSDIDQLGKIFAAFGTPTPSQWPDMVYLP
DYVEYQYVPAPPLRSLFPMASDDALDLLSKMFTYDPKARITVQQALEHRYFSSAPLPTDP
AKLPRPTPKSRPSDFNPQEGPTVLSPPRKSRRVMPDRDRFEGNSNQVEKIDDHVGEARPA
VGDHAGKSDQVPMSVDFSIFGSKPLSRPTINSADRSHLKRKLDLEFQHND
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtcgaagaaagtggcggataggtatttgaagcgcgagattcttggtgaaggt
acttacggtgttgtctacaaagccattgatactaagacaggacagacggttgcaattaag
aaaattcggctggggaagcaaaaggaaggggtgaattttactgcactcagagaaattaaa
cttcttaaggagcttaaaggtccaaatataattgctttaatagatgcattcccacacaag
ggtaatttgcatcttgtgttcgagttcatggagactgaccttgaagctgttattcgagat
cgtaatatattcctctcaccagctgatatcaaatcctacattcagatgactttgaaaggg
cttgctttttgccacaagaaatgggttttacacagggatatgaagccgaataatttgcta
ataggatccaatggacaacttaaacttgcagattttggtttagcacgcatatttggcagc
ccagatcgtaagtttactcaccaggtctttgctcgatggtacagagctcctgagttactt
ttcggtaccaagcaatatgctgctggtgtggatgtttgggcagctgcctgtatatttgct
gaacttctcctccgtcgaccatttctgcagggtacaagtgacatcgatcagttaggaaag
atctttgcagcttttgggacaccaacgccctctcagtggccagatatggtatacctgcct
gattatgtagaataccaatatgttcctgcaccacctttgcgttcattgtttccaatggcc
agtgatgatgctttagatcttttatcaaagatgtttacttatgacccaaaagctaggatt
acggtgcagcaagcattagagcacaggtatttttcatctgctcctctacctacagatcca
gctaagctccctaggcctacccctaaatctcgtccatcagattttaatccccaggaaggt
cctactgtgctttctcccccacgaaaatctaggagagtaatgccagatcgtgacagattt
gaaggtaattccaaccaagtggagaagattgatgaccatgttggtgaagcaagaccggca
gttggtgaccatgcaggaaagagtgaccaggtgccaatgtcagtagatttttcaatcttt
gggtcgaaacctctcagtagaccgacaattaacagtgctgacagatctcatctgaagagg
aaacttgatctcgaattccaacataatgattaa
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