Gossypium hirsutum (upland cotton): 107900471
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Entry
107900471 CDS
T04793
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30
KO
K12900
serine/arginine-rich splicing factor 10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107900471
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107900471
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107900471
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107900471
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107900471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107900471
NCBI-ProteinID:
XP_016681570
UniProt:
A0A1U8IU13
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All DBs
Position
D06:complement(60380392..60384129)
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AA seq
286 aa
AA seq
DB search
MRRYSPQYYSPPRRGYGGRERSPPRRSYGGGGGGGGGGGGGGGGGYGRRREQNNGSLLVR
NIPLDCRPEELRIPFERFGLVRDVYIPKDYYTGAPRGFAFVQFVDSYDAAEAQWRMNGKI
FGGREISVVVAAESRKRPEEMRHKARQRGPSGYGGRSSYYGRSRSRSASPTRSPRRPSGS
RGRYRSRSYSPAPRRRGNYSVSPDRMHEDHPRSPRGPPQDRGGDYNPGSYSPGYENAGGN
GYGEKSAYESEEAPRAARRPSPPVRASRSPPGSRSRSADPSPRRSR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaggagatacagtcctcaatactatagtccgccaaggagaggttatggaggcagagaa
aggagtcccccaaggaggagttatggtggtggtggtggcggcggcggcggcggcggcggt
ggtggtggaggagggtatgggagaaggagggagcagaataatggaagccttttggttaga
aacattcctttggattgcagacctgaagaacttcgaattccatttgagagattcggactt
gttcgagatgtgtatattccgaaagattactatacaggggctcctcgagggtttgcgttt
gtgcagtttgtcgattcttatgatgctgccgaagctcaatggcgcatgaatgggaagata
tttggtgggagagagatatctgtcgttgttgctgcggaatcaaggaaaaggccagaggag
atgcggcataaagcaaggcaaagaggaccatcgggatacgggggacgatcatcttattat
gggcgttcccggtctcgttcagcatctccaacgcgctctcctcgccgtccttcaggttct
agaggccgatatcgctcaaggtcgtactcccctgctccaagacgaagaggaaactattcg
gtttcaccagatagaatgcatgaagaccatccaagatccccaagaggtcctccacaagat
cgtggcggtgattacaatcccggatcatattctccaggatatgaaaatgctggtggaaat
ggctatggcgagaagtctgcatacgaatctgaggaagcaccacgggctgcacggaggcca
tcgccgcctgttagagcatcaaggtcaccccctgggtccaggtctaggtcggcagaccca
tcacctaggcgtagccgttaa
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