Gossypium hirsutum (upland cotton): 107901104
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Entry
107901104 CDS
T04793
Name
(RefSeq) DNA repair protein recA homolog 3, mitochondrial isoform X1
KO
K03553
recombination protein RecA
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107901104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107901104
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
107901104
RecFOR pathway proteins
107901104
TLS (translesion DNA synthesis) factors
Other SOS response factors
107901104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_25
ATPase_2
ABC_tran
AAA_16
AAA_14
nSTAND3
CobU
AAA_35
AAA_22
AAA_24
AAA
MobB
CLP1_P
Motif
Other DBs
NCBI-GeneID:
107901104
NCBI-ProteinID:
XP_016682467
UniProt:
A0A1U8IWG8
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All DBs
Position
D06:complement(13571938..13576329)
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AA seq
419 aa
AA seq
DB search
MATFLRNVSSLKRSLFAPQVCRGGVLRSSSQLCNFSSKGRRKSESDSSDSCDENMFKKDL
ALKLALDQITSSFGKGSIMWLGRAMSPRNVPVVSTGSFALDIALGIGGLPKGRVIEIFGP
EASGKTTLALHVIAEAQKQGGYCAFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS
LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKICHSLSLSQT
ILILINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK
VVKNKLAPPFKNAEFELEFGKGISREGEIIDLATKHKLVTKSGAFYSFNDRKLHGKEAFR
RFLAENGSALEEIVMKLREKLLDAESKKERRIDISDENTSEESVPIETNDEETVIANEA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccacctttcttcgaaatgtttcatctcttaaacgttctctcttcgctccacaggtt
tgtaggggaggggtgttaaggtcatcttctcagctgtgtaacttttcttctaaaggtaga
aggaaatccgagtcagattcaagtgattcgtgcgatgagaatatgttcaagaaagattta
gctctaaaacttgccttggatcagattacgagttcttttggaaaaggatctatcatgtgg
cttggtcgtgctatgtctcctcgaaatgttccagtagtttccactggttcttttgctctg
gacatagcacttggaatcggtggccttccaaagggccgtgtgatagagatatttggacca
gaggcttctgggaaaacaacacttgctttacatgtaattgctgaagcacaaaagcaagga
ggttattgtgcttttgtcgatgctgagcatgctcttgatcctgccctggctgagacaatt
ggggtgaacactgagaatttgctcctttcgcaaccagattgtggagaacaagctctcagt
cttgtggacacccttatacgtagtggatcagttgatgttgtagttgttgacagcgtagct
gcccttgtgcctaaaggcgagcttgatggcgagatgggtgatgctcatatggcaatgcag
gctagactgatgagccaagctcttcgtaaaatatgccattccttatcattgtctcaaacc
atattgattttaataaatcaggtgaggtcaaagctttcgacatttggatttggtgggcca
accgaagttacctgcggtggtaatgccttgaagttttatgcttcagtgcgtctaaatata
aggagaacagggcttgtcaagaaaggagaagagactattggaagtcaagttcttgtgaag
gttgtgaagaacaagcttgcccctccatttaagaatgctgaatttgagcttgagtttggc
aagggaatatcccgggaaggggagatcatagatttggcaacgaaacacaaacttgttaca
aagtctggtgcattctacagtttcaacgacaggaaactccatggcaaggaagccttcaga
aggtttttggctgaaaatggaagtgctcttgaagaaattgtgatgaaacttagagaaaag
ctacttgatgctgagagcaagaaggaacgacgaatagatatctcggatgagaatacttca
gaagaatcagttccaattgaaactaatgatgaagaaactgttatcgccaatgaagcttaa
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