Gossypium hirsutum (upland cotton): 107903437
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Entry
107903437 CDS
T04793
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107903437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107903437
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107903437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
107903437
NCBI-ProteinID:
XP_016684978
UniProt:
A0A1U8J8L4
LinkDB
All DBs
Position
D05:65071176..65078496
Genome browser
AA seq
1036 aa
AA seq
DB search
MGTENPGRPNFPMRPSATPFASAPPTVRPFSSSGPVVGSESSNVRPAPPGAPPTMTPFSS
GGPRPPARFSDPPVPSPPLTSVPPSGGSYQRFVTPPFPLAAQAPPARAPLVGQPPFQPPG
SQVSVPPPSFRPQTQVLPVPMGSPPQNVNFPPSSANVPQPPSDSSFSGPRPNFQMASPLP
DHSATKSSFQPPFPGYPGKQPAVSQAPSPFPAQQGSFMPPPAPPSPFASQQGSYAPPPPV
AANLGYQSRDQMQHPGSAPPTGSIQSLTEDFSSLSISSMPGSIEPGLDYRTLPRPLDGDL
EPNSFLEMYPMNCDPRYLRLTTSAIPNSQSLVSRWHLPLGAVVCPLAEAPEGEEVPVINF
ASTGIIRCRRCRTYVNPYVTFTDAGRKWRCNICSLLNDVPGEYFANLDATGRRIDLDQRP
ELLKGSVEFVAPTEYMVRPPMPPLYFFLIDVSISAVRSGMIEVVAQTIRSCLDELPGYPR
TQIGFITFDSTIHFYNMKSSLTQPQMMVVSDLDDVFVPLPDDLLVNLSESRNVVETFLDS
LPSMFQDNVNVESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGYGRLKLRGDDIRVYGT
DKEHTLRLPEDPFYKQMAADLTKYQIGVNIYAFSDKYTDIASLGTLAKYTGGQVYYYPSF
QSNIHGEKLRCELARDLTRETAWEAVMRIRCGKGIRFTSYHGNFMLRSTDLLALPAVDCD
KAYAMQLSLEETLLSTPTVYFQVALLYTASCGERRIRVHTAAAPVVTDLGEMYRQADTGA
IVSLFCRLAIEKTLTSKLEDARNSLQQRIVKALREYRNLYAVRHRLGARMIYPESLKFLC
LYGLALSKSVPLKGGYADAQLDERCAAGFTMMALPVKKLLKLLYPSLIRIDEYLLKPSAQ
ADDFKNIMKRLPLLAESLDSRGLYLYDDGLRFVIWFGRMLSPDIARNLLGPEFAAELSRV
ALTENDNEMSRRLMKMLKRLRESDPSYYQLPYLVRQGEQPREGFLLLVNLLEDQMGGTVG
YVDWIMQIHRQVQQNA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaatcctggtcgtccgaattttcccatgcgaccttctgctacccctttt
gcttctgctccgccaactgtgagacctttttcatcatctggtcctgtggtgggatcagaa
agcagcaatgttagacctgctccaccaggtgcacccccaactatgacgcctttctcgtca
ggtggacctagaccacctgctcgttttagtgatccaccagttccatctccgcccttaaca
tctgttccaccttctgggggatcttatcagcgatttgtaactccaccgtttcctttagct
gctcaagcaccccctgctcgtgcaccacttgtggggcagccaccatttcaacctcctggg
agtcaagtatcagtgccaccaccttctttccgaccacagacacaagttctgccagtgcca
atgggatctccaccacaaaatgtaaattttcctccatccagtgcgaatgttcctcaacct
ccatctgattcatcattttcggggcccagacccaattttcagatggcttccccccttcca
gatcattctgctaccaagtcgagcttccagccaccttttcctggatatccaggcaagcag
cctgcagtttcacaagcaccgtcaccttttcctgctcagcaaggaagttttatgcctcct
cctgcaccgccttctccttttgctagtcagcaaggaagttatgctcctcctccaccagta
gcagctaacttgggctaccaatcaagggaccaaatgcagcatccaggctctgcacctcct
actggcagcatccaaagcttgacagaagattttagttcactctccatttcatctatgcct
ggatcaattgagccaggacttgattatagaacacttcctaggccattggatggtgatttg
gagccaaattcttttcttgagatgtatcctatgaattgtgatcctagatacctacggctt
actacaagtgctataccaaattctcagtctttagtttcaagatggcatttgcctcttgga
gcagttgtttgtcctcttgcagaggctcctgaaggggaagaagtgcctgtaattaatttt
gcttcgactggtatcattcgttgtagaagatgtcgcacatatgtgaatccctatgtcaca
tttactgatgctggaagaaagtggcgttgcaacatctgttctttactaaatgatgttcct
ggtgagtattttgcgaacttggatgccactggaagaagaattgatttggaccagcggcct
gagcttctaaaaggcagtgtggaatttgttgcaccaactgaatacatggtgcggcctcca
atgccgccactgtatttctttctcattgatgtttcaatatctgcagtaagaagtggtatg
attgaggttgttgctcaaactatacgttcatgtttggatgagctgcctggttaccccaga
acacagattggtttcattacttttgatagcaccattcatttttacaatatgaagtcatct
cttacacagcctcaaatgatggtagtttcagatctagatgatgtatttgtgccattgccc
gatgatctccttgtcaacttgtctgaatctagaaatgtggttgagacgttcctggatagt
ttgccctctatgtttcaggataatgtgaatgtggaatctgcttttggtcctgcacttaag
gctgcattcatggttatgagtcaacttgggggaaagttgctaatattccagaacacattg
ccttccctaggatatgggcgcttgaagttgcgtggagatgatatccgtgtgtatggaact
gataaggaacatacattgagattgccggaagatcctttctacaagcaaatggctgctgat
cttacaaagtaccagataggggttaatatttatgcctttagtgacaaatacactgacata
gcttccttaggaaccctggcaaaatatactgggggtcaagtgtattattatccaagcttc
caatcaaacattcatggagagaagctgaggtgtgagttggccagagatcttactagggaa
acagcctgggaagcagttatgcgcataagatgtggaaaagggattcggtttacatcttac
cacggcaactttatgctgaggtccacagatttactagcacttcccgctgtagactgtgat
aaagcatatgcaatgcagttatcccttgaggagacgcttctttctactccaacagtatat
ttccaagttgctttactatatactgcatcttgtggagagaggcgtatcagagtacatacc
gcagctgcccctgttgttacagatttgggggagatgtaccgccaggctgacactggtgcc
attgtttctttgttttgtagattagcaatcgagaaaacattgacaagtaaacttgaagat
gctagaaattctttgcaacaaaggattgtaaaagcgctcagagaataccgcaatctttat
gctgtgcggcatcggttgggagctaggatgatctatccagagtctctaaagttcttgtgt
ttgtacggattagcactgtctaaatcagtacctctaaaaggaggatatgcagacgctcag
cttgatgaacgctgcgcagcaggtttcaccatgatggcattacccgttaaaaagttgttg
aagcttttatatcctagcttgattcgaattgatgaatatcttttgaagccatctgctcaa
gctgatgatttcaaaaacatcatgaagagattgcctttgctcgcagaaagcctagattca
aggggcctttatttgtatgatgatggcttacgctttgttatttggtttggtagaatgctt
tcacccgatatagcaaggaatttacttggaccagagtttgcagcagaattatcgagggtt
gcgcttaccgagaatgataatgaaatgtcaagaaggctgatgaagatgttaaagagacta
agagagagtgacccttcgtattatcaacttccttatcttgtaagacaaggtgaacagccg
agggaaggtttcctgctgcttgtaaatcttcttgaggaccagatgggcggtactgttggt
tacgtcgattggataatgcaaatacaccgacaagtccaacaaaatgcatga
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