Gossypium hirsutum (upland cotton): 107909122
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Entry
107909122 CDS
T04793
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107909122
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
107909122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
MCM
Mg_chelatase
RuvB_N
Sigma54_activat
Sigma54_activ_2
IstB_IS21
AAA_16
AAA_7
AAA_14
ABC_tran
DEAD
AAA_29
T2SSE
nSTAND3
AAA_24
AAA_28
ResIII
AAA_23
AAA_18
AAA_33
AAA_30
TsaE
DUF6300
NACHT
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
107909122
NCBI-ProteinID:
XP_016692029
UniProt:
A0A1U8JUS9
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All DBs
Position
D08:complement(67184490..67193836)
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AA seq
666 aa
AA seq
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MSGGMWRRWRKLVVMEHLNYLGHWRRIAVGIGGIQHRFSSGGGGDGGGGGGGGDSYDDNN
KNDVAAGSNGRTKSRGKARTKSSGTATSALTRRIKAEINCPRCSNHNFFNFNLPDASLDS
SDGNSSNGKSTVNFCPTCRTAYHFRPHRIYPLQGTFLEIKSNSKAVPPPPPPPPHPRNGV
KTSFWDNLRSENSPPTPPAGNGLAVQTPPGPRFPPGVNFVRADGPKEGHAHGNGTWLGGA
NLGKDLPTPREICKALDKFVIGQQKAKKVLSVAVYNHYKRIYHSSLEKGSGVEEGSLEAL
EDNENVELEKSNVLLVGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL
YKLLTVAEFNVEAAQQGIVYIDEVDKITKKAERLNISRDVSGEGVQQALLKMLEGTIVNV
PEKGARKHPRSDNIQIDTKDILFICSGAFIDLDKTISERQQDSSIGFGAPVRANMRTSWV
TNAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVTLSALTEEQLVQVLTEPKNALGKQF
KKLFSMNNVKLHFTPKALRLIAKKAMAKNTGARGLRAILESILTEAMYEIPDVKTGHNRV
DAVVVDEESVGSTDNPGCGGKILRGDGALKHYFAKTMLKDSIENLSSVEGQSPEAESEVS
TRAVSL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggaatgtggaggagatggaggaagctagtggtgatggagcatttgaattat
ttgggccattggaggaggattgccgtgggaattggtggaattcaacatcgattctccagt
ggcggaggcggcgacggcggcggcggcggcggaggaggtgacagttacgatgataataac
aaaaacgatgttgctgctggttctaatggaaggacaaagagcagaggtaaagctagaacg
aaaagcagtggcactgctacttcggctcttactcgtaggatcaaagcggaaataaattgt
ccgcgatgttctaatcacaatttcttcaatttcaatcttcccgatgcttcgttagattct
tccgatggtaattctagtaacggaaaatccaccgttaatttctgtcctacttgtaggacc
gcttaccactttcgtccccatcggatatatcctcttcagggaactttcttggagattaaa
tccaattcgaaagctgttcctcctcctcctccacctcctcctcatcctcggaacggtgtt
aagacgtcgttttgggataatcttagatccgagaattctccgccaacgccacctgctggg
aatggcctcgctgtgcaaactccgcctggaccgcgctttcctcccggagttaatttcgtg
agagctgatgggcctaaggaaggtcatgctcatggtaatggcacatggttgggcggggcc
aatttgggaaaggatttgcctacaccgagagagatttgtaaagcccttgacaagttcgtt
attgggcagcagaaggcaaaaaaggtgctgtcagttgccgtttataatcactataaaaga
atataccattcctccttggagaaagggtcaggagtagaagaaggaagcttagaagcactt
gaggacaacgaaaatgtggagttagagaaaagcaatgtgctcttggtcggaccaactggc
tctggaaagactttattggcaaaaactctggctcgctttgtcaatgttccttttgtcatt
gcagatgcaacaactttgacacaggctggttatgttggtgaagatgttgaatcgatattg
tacaaactactcacggtggctgagttcaatgtagaagctgctcaacaaggaattgtttac
attgatgaagttgacaagataactaagaaggctgaacgcttaaacattagcagagatgtt
tcaggggagggtgtacaacaagcattgcttaaaatgttagaaggaactattgtaaatgtt
ccagagaagggagcaaggaagcatcctcggagtgacaatatacagatagatacgaaagac
atccttttcatttgtagtggagcatttattgatcttgacaaaacaatttctgagagacag
caagattcttcaattggttttggagcacctgtacgtgctaatatgaggacctcgtgggta
accaatgctgctgtgacatcatctttgcttgaatcagttgagagttccgatcttattgca
tatggccttataccagagtttataggacgctttccaatactagttactttgtcagcttta
actgaggagcaacttgtacaggtgcttacagaaccaaaaaatgctcttggaaagcaattc
aagaagttatttagcatgaacaatgtgaagctacattttacgccaaaagcattgagattg
attgctaagaaggcaatggctaagaacacaggtgcaaggggtttgagagctatactggaa
agcattctcactgaagctatgtatgagattccagatgtaaagacgggacacaatagagta
gatgctgttgtagttgacgaggaatcagtgggttcaacagataaccctggatgtggaggg
aagattcttcgtggagatggtgctttgaagcattactttgccaaaaccatgttgaaggat
tctattgaaaacctttcatcggtagaaggacagtcaccagaagctgaatcggaggtttca
acgagagccgtgagcttgtag
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