KEGG   Gossypium hirsutum (upland cotton): 107912275
Entry
107912275         CDS       T04793                                 
Name
(RefSeq) serine/threonine-protein kinase ATG1a isoform X1
  KO
K08269  serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    107912275
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ghi01001]
    107912275
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107912275
   03029 Mitochondrial biogenesis [BR:ghi03029]
    107912275
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     107912275
Protein kinases [BR:ghi01001]
 Serine/threonine kinases: Other
  ULK family [OT]
   107912275
Membrane trafficking [BR:ghi04131]
 Autophagy
  Autophagosome formation proteins
   Atg1 complex
    107912275
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    107912275
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kdo APH RIO1 YrbL-PhoP_reg Pkinase_fungal
Other DBs
NCBI-GeneID: 107912275
NCBI-ProteinID: XP_016695857
UniProt: A0A1U8K017
LinkDB
Position
D11:complement(9782815..9789081)
AA seq 699 aa
MMTTRVDYGGPGPGQVRLVGDYILGPRIGSGSFAVVWRSRHRQHGLEVAVKEIDKKLLSS
KVSESLLKEISILSTINHPNIIQLFEAIETEDRIFLVLEYCDGGDLAAYIQRYGKVSEEV
ARHLMRQLAAGLQVLQEKHLIHRDLKPQNLLLTKGSTPQLKIGDFGFARSLTPENLADTL
CGSPLYMAPEIIQNKKYDAKADLWSVGAILFQLVTGKPPFDGNNQLQLFQNILRSTELQF
PEGALEKLHPDCVNLCRSLLRHDPVERLTFREFFDHKFLGERSKKVGLELDSSRLQSEAM
VEQFDSSASENKSPLPYRDVIDISSINQKSASSFGCGTVSQTKEYECSSSVKGALGAVAL
TVCDSKGKSVDNQCSPAQLRVADSLEGIEKEYVLVNSHSTSMETFSYYLETSLQDYSTLK
CQAKKSDQEPAVSLEKETAESSAASAKSPQFQGLDMQTSSESAMLREVQRLNVLHPSTRL
QLLHRYARAIAEIAQGKYNAGLFVESFSVELVVLAIWKKALQICSSWKTSAPDNESPGSN
SGNQPTTTIQSSADLAPNSGDNVDLNKPSSACIWAEQGFIVAYDRAEKLSCHLQDMDATA
QMPDAMEIIYQTALTIGTNGAVDEYMRNKGSAAALYSKAMVLLSFIVGEAASLPLNPPFS
LTPANKKRIQAYINNLQTHQSQFLTSAPFPKLSADFHTK
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgatgacgacgagggtggattacgggggaccgggtcctggccaggtccgactagtcgga
gactatattctgggtccaagaatcgggtcgggttcattcgcggtggtttggaggtcaagg
catcgacaacatgggttggaagtcgcagttaaagagattgataagaaactcctgagctcc
aaagtcagtgaaagtctgctcaaggagatatccattctcagcactattaatcaccccaat
atcatccaactttttgaagccattgagactgaagataggatatttctagtgttggaatat
tgcgatggaggggatctcgctgcttatattcaaagatatggaaaagtatcggaggaagtt
gccaggcatcttatgaggcaattggctgcaggattgcaagttcttcaagaaaaacacctt
attcatcgggatttaaagccgcagaacttactgttaactaaaggatcaactccgcaattg
aagataggagattttggttttgcaagatccttgacacctgaaaacttggctgatacacta
tgtggttcaccattgtacatggcacctgagattattcagaataagaagtatgatgcaaag
gctgatttgtggagtgttggggcaatcttatttcaactggtcactgggaagccaccattt
gatggcaataatcaactacagctgttccagaatatattgaggtccactgaattgcagttt
ccagaaggagccctggaaaaattacatcctgattgtgttaatctctgcagaagtctgtta
cgacatgatccggttgagcgactgacattcagggaatttttcgatcacaagttccttggt
gagagaagcaaaaaggtgggccttgagctggactcatcacgtcttcaatcagaagcaatg
gttgagcagtttgattcttctgcctctgagaataaatctccattaccttatcgggatgtc
atagacatatctagcataaatcagaaatcagctagttcatttggatgtggtacggtatca
caaacaaaggagtacgagtgttcatccagtgtcaaaggtgctcttggggcagtggctctt
actgtatgtgatagcaaaggaaaatctgttgataaccagtgttcaccagctcagctcaga
gtagctgactcattggaaggtattgagaaggaatacgttctagtcaattctcattccaca
tcgatggagactttctcttattaccttgagacgtccctccaagattattcaactttgaag
tgccaagcaaagaagagtgaccaggaaccagcagtttctctggaaaaggagaccgctgaa
agttctgccgcttctgcaaaatctccacagtttcagggattggatatgcaaacatcatct
gaatcagctatgctaagggaagtacagagacttaacgtattgcatccctcaactaggctg
cagttattgcatcggtatgcacgggctattgcagaaatagctcaaggaaagtataatgca
ggactatttgtagaatcattttcagttgaacttgttgtcttggctatatggaagaaagct
cttcagatctgtagctcttggaaaacctctgctccagacaatgaatcacctggaagcaat
tcaggcaatcaacctactaccactattcagagtagcgcagacttggctccaaattcaggt
gacaatgtagatttaaacaagccttcatctgcttgcatctgggcagagcaaggatttatc
gttgcttatgatcgtgccgagaagttgtcatgtcatcttcaagatatggatgctacagca
cagatgcctgatgccatggaaataatatatcaaaccgcactcactatcgggacaaatggc
gctgtagatgagtatatgcggaacaaaggtagtgctgcggcattgtactctaaagcaatg
gttttactttcatttattgtaggagaggcggcaagtcttccattgaacccaccattttca
ttgactcctgccaataagaagcgaattcaggcatacattaacaacttgcagactcatcaa
tctcagtttctaacatcagcaccgtttcctaagctgtctgcagacttccacaccaaatga

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