Gossypium hirsutum (upland cotton): 107914294
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Entry
107914294 CDS
T04793
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107914294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107914294
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107914294
Complex B
107914294
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
107914294
NCBI-ProteinID:
XP_016698653
UniProt:
A0A1U8KCF7
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Position
D10:12504743..12509649
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AA seq
467 aa
AA seq
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MGDYNDAFMRNQNAAAAVQARVKPPQNRANIQQLKLIGQSHPTGLTANLLKLFEPRPPLE
FKPPPEKRKCPPYTGMAQFVSHFAEPGDPEYSPPVQEAETPAQRRARIHKLRLEKGLEKA
AEELKNYDPNNDPNVSGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLVTDKSTNK
PRGYAFIEYMHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRIG
GEDVTQREQIQSGPSRSEEPRIREDRHGDRDREKSRERGREREREREKSRERSHDRPRDR
DREDRHHRDRERTRDRDRDRERDRGGRDRDRARERGRDRGRDYERDRERDRERERDRDRD
YDAGDYERDRGRSRDRDRESDYDRVESKHERDRHSERDYDHGEPDEDRGWYEQHDHGHRR
SDLDDQHYEYYDHHRGRGEYDLDAHGDRYDQYSDRDRYDGMEEDDYR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggagattacaacgatgccttcatgcgcaaccaaaacgccgccgccgccgttcaggct
cgcgttaaaccccctcagaatcgcgccaatattcagcagctcaagctgattggccaaagc
catcctactggtttaacagctaaccttttgaagctctttgaaccacgacctccgttggag
tttaaaccgcctcctgagaagagaaaatgtcctccgtatacaggaatggcacaatttgtg
agtcactttgctgagccaggagatcctgagtattccccgcctgttcaggaagcagaaaca
cctgcacaacggagagcaagaattcataagttgcgactagagaagggcttggagaaggct
gctgaggagctgaaaaactatgatccaaataatgacccaaacgtttcaggtgatccatac
aagacactgtttgttgctagacttaattatgagacatccgagagtagaattaaaagggag
tttgagtcttatggaccgattaagcgggttcggttggttactgataaatccacaaataaa
ccaagaggctatgctttcatcgagtacatgcatactcgggatatgaaagctgcttataaa
caagctgatgggaggaagattgatggtagaagggttcttgtggatgttgagcgcggtagg
acagtccctaattggcgccctcgtaggctaggtggtggacttggaactaccaggattggt
ggtgaagatgttactcaaagggaacaaatccagtcaggaccgtctcgttctgaggagcca
cggattcgagaggatcgacatggtgaccgggacagggagaagtcccgtgaaagaggaagg
gaacgggagagggagcgtgaaaaatcacgtgagcgctcccatgacagaccgagagatcgc
gatagggaggatagacaccacagagatcgtgaaagaactagagacagagatagggacaga
gagagagaccgcggtggtcgtgatcgtgaccgagcacgtgaacgaggccgggatcgtggt
cgtgattatgagcgcgatagagaaagagaccgtgagagggagagggacagggacagggat
tatgatgctggtgactatgaacgtgaccgtgggcgttctagggatagggatagggaatct
gattatgaccgtgttgagtccaaacatgagagagatcggcacagtgagagggattatgat
catggtgagccagatgaggatcgtgggtggtatgaacagcatgatcatgggcataggcgg
tcagacctagatgaccaacactatgaatactatgatcatcatcggggtcgaggagaatat
gatctggatgctcacggggatcgttatgatcaatattctgaccgtgatcgttatgatgga
atggaagaagatgattacaggtga
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