Gossypium hirsutum (upland cotton): 107916910
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Entry
107916910 CDS
T04793
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog isoform X1
KO
K14799
pre-rRNA-processing protein TSR1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107916910
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107916910
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GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
DUF211
Motif
Other DBs
NCBI-GeneID:
107916910
NCBI-ProteinID:
XP_040973247
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Position
A01:20129903..20137286
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AA seq
796 aa
AA seq
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MEGSRAQVNKPHKTRFSSKSSRNIHKISHKDKNWIAKSNRNVTQGARAARLQRSKMLREQ
KKEALLKEKRASSGSASPPRVILLFPLSASVNVSSLAEDILRLLSADVGGAFSSTVVSSE
YKLRATVLHAPHGDLLSCMEMAKVADLIAFVASATEQSTCDYIDSFGSQCLSVFRSLGLP
STVVFIRDLPTELKRRNDAKKIVTSSLTSEFPEDCKFYPADTKDDLHKFMWLFKEQRLTT
PHWRNQRPYLIAQKVDMVPDDSSPEKCTLLLTGYMRAHSLSVNQLVHVSGAGDFQLNRIE
IMKDSIPLNARKDHNAMDSDDIQDAEIIHSLAPDPSSQEPLLVENVPDPLAGEQTWPTEV
EMAEAERNQKQKRLRKRALPRGTSEYQAAWIVDDTDGEDSGVENDGDDDEDDDGMLLDEG
ESGFPSQEDTNNSDFEEDQASLHLRDSDEETENDSVMMEGDNMTREQIEDEIKKIKEAHA
EDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDNFARTQKH
VVAKALKVEQEGRDDCAPVGSFARFYIKEVPFHVASKLCAASRTAPIVLCGLLQHESKMS
VLHFSIKKHDSYDAPIKSKEELIFNVGFRQFVARPNFSTDNINSDKHKMERFLHAGHFSI
ASIYAPISFPPLPLIALKSAAGAGTPAVAAVGSLRSIDPDRIILKKIILTGYPQRVSKLK
ATVRYMFHNPEDVRWFKPVEVWTKCGRRGRVKEPVGTHGAMKCIFNGGLQQHDTVCMSLY
KRAYPKWPEHRFPANV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatctcgagctcaagtcaataagcctcacaaaactcgtttctcctctaaatct
tctaggaacattcataaaatctctcacaaagacaagaactggattgcaaaatcaaaccgt
aatgtaacgcagggagcccgagctgctcggcttcagcgaagcaagatgctaagagagcag
aagaaggaagctcttttgaaagaaaaaagggcttcaagtggatcagccagccctccccgt
gtcatccttcttttccctctttctgcatctgtgaatgtaagttcacttgctgaagacatt
ttgagattgctatcagcagatgttggcggagctttttcatcaacagtagtttcttcagag
tacaaactgcgagcaacagtactgcatgctcctcatggggacctattatcgtgtatggaa
atggccaaggttgctgatttgattgcttttgtggcatcagctactgaacaaagcacatgt
gactatattgattcatttggaagtcaatgcctttcggtgttcaggtctctaggcttaccg
agcactgtcgttttcattcgtgatctgcctactgagcttaaaagacgaaatgatgcaaag
aagatcgttacttccagccttacttctgaatttccagaagattgcaagttttatcctgca
gatacgaaggacgacttgcacaagttcatgtggctttttaaggagcaaagactcacaaca
ccgcattggagaaatcaacggccttatcttattgctcaaaaagttgatatggtaccagat
gactccagtccagagaagtgtacacttctcctcactggttatatgcgtgctcacagcctc
tcagtgaaccagctggttcatgtgtctggtgcgggggattttcagttgaatagaattgaa
attatgaaggattctatccctttaaatgctagaaaagatcataatgctatggattctgat
gacatacaagatgctgagatcattcattccctagctcctgatccatcaagccaggagcct
ttgcttgttgagaatgttccagatccacttgctggagaacagacatggcccactgaagta
gaaatggctgaggctgaaagaaatcaaaagcagaagaggttgagaaagagagctctccct
cgaggcacttctgagtatcaggctgcttggatcgtagatgatacagatggagaggattct
ggtgtggagaatgatggagatgatgatgaggatgatgatggcatgttgttggatgaagga
gaaagtggctttcctagtcaagaagacaccaataattcagattttgaggaagatcaagct
tccttgcacttaagggactctgatgaagaaactgaaaatgattcagtgatgatggaaggg
gacaatatgacaagggaacagatagaggatgagattaaaaaaataaaagaggcacatgcc
gaagatgaggaatttccagatgaagtggatactccactagatgttcctgctagaaagcga
tttgcaaaatatagaggcctcaagtcttttaggacatcctcgtgggaccccaaagaatct
ctacctccagaatatgccagaatttttgcttttgataattttgcaagaacacaaaagcat
gttgttgcaaaagctttaaaagtggagcaagagggcagggatgactgtgcgccggttggt
tcatttgctaggttttatatcaaggaggtcccttttcatgttgcttccaaattgtgtgcg
gcctcaagaactgcacccattgttttatgtggtctcctgcaacatgagtctaagatgtct
gttcttcattttagtataaaaaagcatgatagttatgatgctccaattaaatctaaagaa
gaactcatattcaacgttggtttccgtcagtttgttgctagaccgaacttttcgactgac
aatattaattcagacaagcacaagatggaaaggtttcttcatgccggacatttttcaata
gcatcaatatatgctcccatttcttttccacctctccccttgattgctctgaagagtgca
gcaggagccggcactcctgcagttgctgctgttggttccttgagaagtattgaccccgat
agaataattttaaagaagattattttaactggttatcctcaacgagtatccaagttaaaa
gccacagtgcgatatatgttccataatccagaggatgtgagatggtttaagcctgttgaa
gtgtggacgaagtgcggtcgtcgtggtcgagttaaggaacccgttggtacccatggtgca
atgaaatgcatatttaatgggggccttcaacaacacgatactgtttgcatgagcttgtac
aagcgggcatatccaaagtggccggaacaccggttccctgctaatgtttga
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