Gossypium hirsutum (upland cotton): 107916936
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Entry
107916936 CDS
T04793
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107916936
Spliceosome [BR:
ghi03041
]
Complex A
Other components
Complex A specific factors
107916936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
107916936
NCBI-ProteinID:
XP_016701804
UniProt:
A0A1U8KM60
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All DBs
Position
D08:4493249..4503718
Genome browser
AA seq
1040 aa
AA seq
DB search
MDHAPARYPLQRGSDNNSALEGFSAVPVPNYRVRGSYDERRFLDERYSSASFYPRSAYHH
YFPEKDNHSPPAAAGVWSQSRGRSYEEEYPRDEDSRHHQKLYVYSYRDMDTYCDHEIAFQ
DFDKFRDGYRCVDNICDHEFGRPSRYGGQDWEDYSYDYYDYRPHISHQSRDNSRERNYEY
SRNSYDSYHKRGSCRDGSWRKRESRDRDSFSRERDQSPHKRHERSWSRSRGCDDRPRSRS
PRVWSHGRSHREDRYDDYQNEKTQKQRDREEKYQLEQYSVAPSATIVVKGLSHKTTEEDL
CQILAEWGPLRHVRVIKERTSGISRGFAFIDFPSVGAARSMMDKIGDDGLVVDGRKLFFD
YSSKPTGGTGGPSAHNNAVKLGHSNHKSTTLPSDWMCTICGCVNFARRTACFQCNEPRTN
DAPAADISLSGKRGSESVGPTHVLVVRGLDENADEEMLRYEFSKYAPIKDLRLVRDKFTH
VSRGFAFVHYHSVGDATKALEATNGTTLEKNGQILRVAYARSIIGPRSGTLGSLQSSSLA
AAAIEAAAFSQQYDAVGWTRKEYNPDDKQSTTWQEQAGGSFAVQQDYSALHSGFVWDEAS
GYYFDAASGFYYDGNTGLYYDGNSGSWFSYDHQSQQYIPCSDQNDNIIPGKESELSREAD
GSNNSKVITSAPAATVTSVEKAASLPDAVEAAAAAALAAEKKEKEKSREIKLASKSSILA
NKKKMNNVLTMWKQRSHEGKASRSGLNDNHLSASSEDRPLSAEQHAKSKDKFDMMDLKEG
DTRSSGVNTTAQATSTWGLRSPAKPRPINNRSGGTLMGVIRGSARGLVKSDIPFPRSSAG
VSTSSAGGVAEGSLSSTSDPASMTPFRTDASASGSIAPSTITGSGKRRFSEAPVPPTTNK
VQSQTTYRDRAAERRNLYGSSSSTADDIPDDPMPFPPGVGGGRWAVSDDVQSFEVITAKK
AIDKNNVGNRMLRSMGWHEGLGMGKDGSGITEAVEAQGMDTRAGLGIQVKKLDPSLEVQA
GDSYKTVIHKKALARFHQMS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgctcctgctcgctaccctcttcagcgaggatcggataataacagcgctctt
gagggattttctgctgttcctgtacccaattaccgggtccgtggttcttatgatgagagg
agatttctagatgaaagatactccagtgctagtttttatccaagaagtgcctaccaccat
tattttccagagaaggataatcattcccctcctgctgctgctggtgtctggtctcaatca
agggggagaagttatgaggaagaatatccccgtgatgaggattctaggcatcatcagaag
ctttatgtgtattcatatagggacatggatacatattgtgatcatgagatcgcttttcaa
gattttgataagtttcgggatggctatcgttgtgttgacaacatctgtgatcatgaattt
ggcaggccctctaggtatggggggcaagattgggaagactactcatatgattattatgat
tataggcctcacatttcccatcagagcagggacaacagccgtgagaggaattatgaatat
agtcgaaatagttatgattcttatcataaaagaggcagttgcagagatggtagttggagg
aagcgtgaatcacgtgatcgagattctttcagtagagaaagagatcagagtccacataaa
aggcatgagaggtcttggtcacgttcccgtggatgtgatgatcgtccaagatcaaggtca
cctcgagtttggagccatgggcgaagccatagagaggacagatatgatgattatcaaaat
gagaaaactcagaagcaaagggaccgagaagagaaatatcagctggagcaatattctgtg
gcaccatctgcaactattgttgtaaagggtctatcgcacaaaacgacagaggaagatctt
tgccagattcttgctgaatggggcccacttcgtcatgttcgtgtgatcaaggagcgaacc
tctggcatttctcgtggatttgcttttattgattttccttcagtgggggcagcacgctca
atgatggacaagattggtgatgatggtcttgttgtggatggtaggaagcttttctttgat
tacagtagtaagccaactgggggcactggtggaccttctgctcataataatgctgtgaaa
ttgggtcactcaaatcataagagcaccacattaccgtctgattggatgtgcacaatttgt
ggatgtgtcaattttgcacgtcgaactgcatgttttcagtgtaatgagccacgtactaat
gatgctccagcagctgacatatctttatcaggaaagagaggatctgagtcagtaggtcct
acccatgtattggttgttcgtggattggatgaaaatgctgatgaggaaatgcttcgttat
gagttttctaaatatgccccaattaaggatcttcgccttgttagagacaagttcactcat
gtttcaaggggatttgcttttgtacattaccattcggttggtgatgccacaaaagccctt
gaagccacaaatgggacaacccttgagaagaatgggcaaatcttaagagtagcatatgca
aggagcattattgggccaagatcagggacattgggatctttacagtcaagtagccttgca
gctgctgcgattgaggcagcagctttttctcaacagtatgatgctgttggatggacacga
aaggaatataacccagatgacaaacagtctactacctggcaggagcaggctggtggttca
tttgcagttcaacaggattattcagctttgcattctggatttgtgtgggatgaagcctct
ggttattactttgatgctgcttctgggttttactatgacgggaatacaggcctttattat
gatggtaacagtgggtcttggttttcgtacgaccaccaatcccagcagtacatcccttgc
agtgatcagaatgacaacataatacctggtaaagaatctgagctttctagagaagctgat
ggttccaataattcaaaagtaataacatctgcaccagctgctacggtcacatcagttgag
aaggcagcctcactaccagatgcagttgaagctgcagcagcggcagcactggctgcagag
aagaaagagaaggagaaatcaagagagataaaacttgcttcaaagagtagtatactggct
aataagaagaagatgaataatgtgttaacaatgtggaaacagaggagtcatgaagggaag
gcatcccgatcaggtcttaatgacaatcacctgtccgcttcatcagaagataggcctctt
tcagccgaacaacatgcaaaaagcaaggataaatttgatatgatggacctgaaggagggt
gatacaagaagttcaggagtcaatacaactgcccaagctacatcgacatggggtttgagg
tctccagccaagccaaggcctataaataacaggtcaggggggactttaatgggagtaata
agaggttctgcaaggggcctggtgaaatctgatattccatttcccagatcatctgctgga
gtttcaacctcttctgctggtggagttgctgagggttcattgtcatcaacttcggatcct
gcatctatgactccctttaggactgatgcatctgcatcgggttctattgcaccttcaact
ataactgggagtggtaaaagaaggttttctgaagcaccagtgcctcccactaccaacaag
gtgcagtctcaaaccacttatagggaccgtgcagctgagaggaggaacttgtatggttca
tcatcttccaccgctgatgatatacctgacgatccaatgcctttcccacctggagttggt
ggtggacggtgggctgtatcagatgatgtgcaaagtttcgaggttatcacagcaaagaaa
gcaattgataagaacaatgtgggcaaccgaatgctccgcagtatgggttggcatgaagga
ttgggaatggggaaggatggaagtggaataacagaagcagttgaagcacagggaatggat
acaagagcgggacttggaattcaggtgaagaagttggaccctagccttgaggtgcaagct
ggcgatagttacaaaactgtgattcataagaaagcacttgctaggttccaccaaatgtca
tag
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integrated database retrieval system
