Gossypium hirsutum (upland cotton): 107917830
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Entry
107917830 CDS
T04793
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107917830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107917830
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
107917830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
107917830
NCBI-ProteinID:
XP_016702667
UniProt:
A0A1U8KJN8
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Position
D08:36733719..36736583
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AA seq
305 aa
AA seq
DB search
MRPPRGRGGGGGFRGRGDGGRGRGRGGGGGRGGDRGGSGMKPRGGGRGGGRGRGGGRGGM
KGGSKVVVEPHRHEGVFVAKGKEDALVTKNMVPGEAVYNEKRIAVQNEDGTKVEYRVWNP
FRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDVVGPNGVVYAVEFSHRSGRD
LVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGH
FVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYRMPKKQ
KAGAA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagacctccaagaggccgtggtggtggtggtgggtttaggggcagaggtgatgggggg
agagggagaggaaggggtggtggtggtggaagaggtggcgataggggaggcagtggcatg
aagccccgtggtggtggccgcggtggaggaagaggacgtggtggtggaagaggaggaatg
aaaggtgggagcaaggttgtagttgagccccatagacacgagggagtttttgttgccaag
ggtaaagaagatgctcttgttactaagaatatggtgcctggtgaggctgtctacaatgaa
aagaggattgctgttcagaatgaagatggaaccaaagttgagtacagggtttggaaccct
ttccgatccaagttggcagctgcaattcttggtggtgttgataatatatggattaaaccc
ggtgctaaggttctctaccttggagctgcttcgggtaccactgtttctcatgtatccgat
gttgttggtcctaatggagtggtttatgctgtggaattttctcacagaagtggtagggat
ttggtcaacatggctaagaagcgaacgaatgttatacctatcattgaagatgctaggcat
cctgctaaatacaggatgctagttggcatggtggatgtgatattttctgatgttgcgcag
cctgatcaggcaagaattctggctttgaatgcatcatatttcctgaaggctggaggtcat
tttgttatttcaatcaaggcaaactgcattgactcaacggtccctgctgaggctgtattc
cagagtgaagttaagaaattgcaacaggagcagttcaagcctttcgaacaagtcactctc
gaaccatttgagcgtgaccatgcatgtgttgttggcggctaccgcatgccaaagaaacag
aaagctggtgcagcctaa
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