Gossypium hirsutum (upland cotton): 107922495
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Entry
107922495 CDS
T04793
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107922495
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107922495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
GRA6
zinc_ribbon_9
Sgf11
TF_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
107922495
NCBI-ProteinID:
XP_040965110
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Position
D13:complement(55913988..55923385)
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AA seq
606 aa
AA seq
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MVYCNNCSRNVSGERLDEGLLSCSFCGKVLEEYNFATEPQFVKDSAGQSKLSGNFVRSVQ
AISDSRRRTLDYASEQMSGMKNALQIDDYSDDVVHTARRFYEIGLERNFTRGRRSELVQA
ACLYLACRQKRKPFLLIDFAHYLKINVYELGSVYLQLCYVLYLADGKDLQKLIDPSIFIH
KFTNALIPEGNDEVVKTARNILASMKRDWMQTGRKPSGLCGAALYISALSHGLKFPKSEI
IKHVYICEATLSKRLIEFENTNAGALTMEEFTEKERELRTSSLTRKQPNTGSKETSLDEV
LCRHKERKPFAYGLCNECYEEFMKVSGGLDGGSDPPAFQRAEKERLAKLSIEENAKSKSS
CTSASGSEKPENCGTLEDATNKEAIDEGDNDKLPGVDGSDDESDNFSDIDDFEVDGYLHN
EEEKRFKKIIWEEINREYLEEQAAKEAALAAAKEACMANYDKCPEDLQAAQELAAAAAEV
VAKSKKERLQKRAAEAKNAGPAKTAAEATRQMLVKKRLSSKINYDALEKLFDEPVATEKC
KKQRIESNFDSDEKEERASKIGKDEGDYDEGDEEDGGIYDDNPEFDKQVYDYDDNDYGYG
YDYDGY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggtttactgtaataattgctccagaaacgtttctggagaacgcctcgatgaaggtctt
ttgtcgtgttctttctgcgggaaggtgttggaagaatacaattttgcaaccgaacctcaa
ttcgttaaagattcagctggccagagcaaactgtccggaaattttgtaaggtctgttcaa
gctatttcagattcacgtaggcgtactttggattatgcttctgagcaaatgagtggtatg
aagaatgcattacaaattgatgattatagtgatgatgttgttcatacggctagacgcttt
tatgaaatcggccttgagcggaatttcactagggggcgcagatcagagctagtacaggct
gcatgtctttatcttgcatgtcggcaaaagagaaagccgttccttcttattgattttgca
cattatttaaaaataaatgtctatgagcttggctctgtatatctgcagctttgctatgtg
ctgtaccttgctgacggaaaagatcttcagaaactaattgatccttcaatttttattcat
aaatttacaaatgctttaattccagaagggaatgatgaagttgttaaaactgcacgtaac
attttagctagcatgaaacgagactggatgcagactggaagaaaacccagtggattgtgt
ggtgcagcactgtacatttctgcactttcacatggtctgaagtttcctaagtcagaaatt
ataaagcatgtttacatttgtgaagcaacattgtcaaagcggttgattgaatttgagaat
actaacgctggagccttaacgatggaggagtttacggaaaaggagagggagcttcgaact
agttcattaactagaaaacaaccaaatactgggtcaaaagaaaccagcttagatgaagtg
ctatgtaggcacaaggagagaaaaccttttgcctatggactttgtaatgaatgttatgaa
gagttcatgaaggtttcaggagggcttgatggaggatcagatccacctgcattccagcgt
gctgagaaagagaggctggcaaaattatctattgaggaaaatgctaaaagcaaatctagc
tgcacttctgcaagtggatctgaaaaacctgaaaattgtggaactttagaagatgcaact
aataaggaagccattgatgagggtgacaatgataaattacctggagttgatggtagtgat
gatgaatcagataacttctctgatattgatgattttgaggttgatggttatcttcacaat
gaggaggagaagcgtttcaaaaagatcatttgggaagaaataaaccgggaatatcttgag
gaacaagcagccaaggaagcagctttagcagctgctaaggaggcttgcatggccaactat
gataaatgtccagaggacctccaagctgcacaggagcttgccgcagctgctgcagaagta
gtggcaaaatctaaaaaggagaggctacaaaagcgagctgctgaagctaaaaatgcaggt
cctgctaagactgctgctgaggcaacccgacaaatgctggttaagaagagactaagctca
aaaatcaactatgatgcgttggagaaactttttgatgaaccggtggctacagagaaatgc
aagaaacaaagaattgaatcaaattttgattcagatgaaaaggaagagagggcctctaaa
attggcaaagatgaaggtgattatgatgaaggagatgaagaagatggaggaatttatgat
gataatccggaatttgacaagcaagtttatgattacgatgacaatgattatggttatggt
tatgattacgatggatattga
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