Gossypium hirsutum (upland cotton): 107922928
Help
Entry
107922928 CDS
T04793
Name
(RefSeq) pentatricopeptide repeat-containing protein At3g48250, chloroplastic
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_long
PPR_3
Exog_C
Motif
Other DBs
NCBI-GeneID:
107922928
NCBI-ProteinID:
XP_016708622
UniProt:
A0A1U8L1Z3
LinkDB
All DBs
Position
A11:4001713..4003894
Genome browser
AA seq
620 aa
AA seq
DB search
MNRSKAILSSLRLANSLLSTRLTSTPSFSSQVTRFSSQLSFQSHSSLLTNIHQSLSFSTK
PNSLLQLILTNDWSDELVTSLHEFNSALTHETVIYVLKKLDKDPKKASSFFNWVRQEKGF
KPNSSVYSFMLRIFANKATMKEFWVTLREMKDLGFYLDEETYYTIHSSFRNNKMPSDVVA
LTHFYKRMVEENAKDSIARKIADVIAGDEWSNETEKILDGMGTDLSDNLVIRVLKELRTY
PTKGLQFFHWASKDSNYKHNTVTYNALIRILARHDSIAEFWGVVDEMKGEGFEMDIDTYI
KVSRNFQKFKMLEDAVKLYEIMMDGPYKPSAQDCSLLLRSISGADGQDLSLVFRVVNKYE
AAGYSLSKAIYDGIHRSLTKAGKFDEAEKIMKAMKNAGCEPDNITYSQLVFGLCKARRLE
EACKVLDEMKANGCCPDIKTWTILIQGHCDANQIDDALMCFAKMVKTLEADADLLDVLIN
GFISQNRVDGAYKLLVEMVNVVHLRPWQATFKLLIEKLLGKRKLEESMNLLKLMKKQNYP
PYPEPFVQYISKQGTVEDAMEFLKALSVKEYPSIGAYLDILESFLEEGRHTEAQDLLYKC
PHHIRNHPKTSQLFGTKSTA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggtccaaggcaatcctctcctcactcaggttagccaactcgcttctttccact
cgactcacctcaactccttccttctcctcacaggtgactcgcttctcttcacagctctcg
tttcaatcacactcttctcttttaaccaacatccatcaaagcctttccttctctacaaaa
cccaactcgttgcttcaactcattctgaccaacgattggtctgacgagttagtgacctcc
ttacacgagtttaactctgcattgactcatgaaactgtcatctatgttcttaagaaactc
gataaagaccccaaaaaggcatcgagtttcttcaattgggtgcgtcaagaaaaagggttt
aaacccaattcttctgtctatagctttatgcttaggatttttgctaataaagccacaatg
aaagagttctgggtaactttaagggaaatgaaggacctgggtttttatcttgacgaagaa
acttattatacaatccattcttcttttagaaacaataagatgcctagtgatgttgtggcc
ttaacccatttttataaaaggatggttgaagagaatgctaaggatagtattgctcgtaag
atagctgatgttattgctggggatgaatggagcaatgagactgagaaaatattagatggt
atgggaactgatttgtctgataatttagtgataagggtgttgaaggaacttagaacttac
cctacgaaaggtttacagttttttcattgggccagtaaggattctaattataagcataat
acagttacttacaatgctcttataaggattcttgctaggcatgattctattgctgagttt
tggggtgttgtggatgagatgaagggtgaaggatttgagatggatatcgatacgtatata
aaagtttcgaggaactttcagaagtttaagatgttggaggatgctgtgaaactttatgaa
atcatgatggatggtccatataagccttcagcacaagattgcagcttactcttacggagc
atttccggtgctgatggacaagatttgagtttggtgttcagggtagtgaataaatacgag
gctgctggatattcactgtccaaggctatttatgacgggattcatcgttctttaaccaag
gcgggtaagtttgatgaagcggagaagatcatgaaagcaatgaaaaatgctgggtgcgaa
cctgataacattacgtacagccaactggtgtttggactttgtaaagcaagaagactcgaa
gaagcctgcaaagtgttggatgaaatgaaagcaaatggatgctgtccggatatcaagaca
tggactattttgattcaaggccattgtgatgctaatcagatcgatgatgcattgatgtgt
ttcgcaaagatggtgaaaacccttgaagcggatgctgacttgttggatgtcttaataaac
ggtttcatcagtcagaatagagtagatggtgcatacaaattgctggtggagatggtaaat
gtagttcacttaagaccttggcaagcaacatttaaacttcttatagagaagcttctgggg
aaaagaaaacttgaagaatcgatgaaccttcttaagttgatgaagaaacaaaactaccca
ccttaccctgaacctttcgttcaatatatttcaaagcaggggactgtggaggacgctatg
gagttcttgaaagcattgagtgtgaaggaatatccaagcattggagcttaccttgatatt
cttgaatcatttttggaggaaggtagacataccgaggcacaagatctgctatataaatgc
cctcatcatattcgtaatcatcctaaaacatctcaactctttggtaccaaatctactgct
tga
DBGET
integrated database retrieval system
