Gossypium hirsutum (upland cotton): 107923950
Help
Entry
107923950 CDS
T04793
Name
(RefSeq) serine/threonine-protein kinase ATG1a isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107923950
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ghi01001
]
107923950
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107923950
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107923950
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107923950
Protein kinases [BR:
ghi01001
]
Serine/threonine kinases: Other
ULK family [OT]
107923950
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
107923950
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107923950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kdo
RIO1
APH
YrbL-PhoP_reg
Pkinase_fungal
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
107923950
NCBI-ProteinID:
XP_016709655
UniProt:
A0A1U8L4V8
LinkDB
All DBs
Position
A11:complement(10629366..10634295)
Genome browser
AA seq
696 aa
AA seq
DB search
MMTTTVDYGGPGPGQVRLVGDYILGPRIGSGSFAVVWRSRHRQHGLEVAVKEIDKKLLSS
KVSESLLKEINILSTINHPNIIQLFEAIETEDRIFLVLEYCDGGDLAAYIQRYGKVSEEV
ARHLMRQLAAGLQVLQKEHLIHRDLKPQNLLLTKGSTPQLKIGDFGFARSLTPENLADTL
CGSPLYMAPEIIQNKKYDAKADLWSVGAILFQLVTGKPPFDGDNQLQLFQNILRSTELQF
PEGALEELHPDCVNLCRNLLRHDAVERLTFREFFDHKFLGERSKKVGLELDSSRLQSEAM
VEKFDSSASEKKSPLPYRDLIDISSINQKSVSSFGCGKASQTKEHSSVKGALGAVALTGC
DSKGKSVDNQCSPAELRVADSLEGIEKEYVLVNSRSASMETFSYYLETSLQDYSTLKCQA
KKSDQEPAVSLEKETAESSVASAKSPQFQGSDLQTSSESAMLREVQRLNILHPSTRLQLL
HQYALAIAEIAQGKYNAGLFVESFSVELVVLAIWKKALQICSSWKTSAPENESPGSNSGN
QPTTTIQSSAGLAPNSGDNVDLNKPSSACIWAEQGFINAYDRAEKLSCHLQDMDATAQMP
DAMEIIYQTALTIGTSGAVDEYMENKGSAAALYSKAMVLLSFIVGEAASLPLNPPFTLTP
ANKKRIQTYINKLQTHQSQFLTAAPFPKLSADFHTK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgacggtggattacgggggaccgggtcctggccaggtccgactagtcgga
gactatattctgggtccaagaatcgggtcgggttcattcgcggtggtttggaggtcaagg
catcgacaacatgggttggaagtcgcagttaaagagattgataagaaactgctgagctcc
aaagtcagtgaaagtctgctcaaggagataaacattctcagcactattaatcaccccaac
atcatccaactttttgaagccattgagactgaagataggatatttctagtgttggaatat
tgcgatggaggggatctcgctgcttatattcaaagatatggaaaagtatcggaggaagtt
gccaggcatcttatgaggcaattggctgcaggattgcaagttcttcaaaaagaacacctt
attcatcgggatttaaagccgcagaacttactgttaactaaaggatcaactccgcaattg
aagataggagattttggttttgcaagatccttgacacctgaaaacttggctgatacacta
tgtggttcaccattgtacatggcacctgagattattcagaataagaagtatgatgcaaag
gctgatttgtggagtgttggggcaatcttatttcaactggtcactgggaagccaccattt
gatggcgataatcaactacagctgttccagaatatattgaggtccactgaattgcagttt
ccagaaggagccctggaagaattacatcctgattgtgttaatctctgcagaaatctgtta
cgacatgatgcggttgagcgactgacattcagggaatttttcgatcacaagttccttggt
gagagaagcaaaaaggtgggccttgagctggactcatcacgtcttcaatcagaagcaatg
gttgagaagtttgattcttctgcctctgagaagaaatctccattaccttatcgggatctc
atagacatatctagcataaatcagaaatcagttagttcatttggatgtggtaaggcatca
caaacaaaggaacactccagtgtcaaaggtgctcttggggcagtggctcttactggatgt
gatagcaaaggaaaatctgttgataaccagtgttcaccagctgagctcagagtagctgac
tcgttggaaggtattgagaaggaatacgttctagtcaattctcgttccgcatcgatggag
actttctcttattacctggagacgtccctccaagattattcaactttgaagtgccaagca
aagaagagtgaccaggaaccagcagtttctctggagaaggagaccgctgaaagttctgtc
gcttctgcaaaatctccacagtttcagggatcagatttgcaaacatcatctgaatcagct
atgctaagggaagtacagagacttaacatattgcatccctcaactaggctgcagttattg
catcagtatgcactggctattgcagaaatagctcaaggaaagtataatgcaggactattt
gtagaatcattttcagttgaacttgttgtcttggctatatggaagaaagctcttcagatc
tgtagctcttggaaaacctctgctccagaaaatgaatcacctggaagcaattcaggcaat
caacctactaccactattcagagtagcgcaggcttggctccaaattcaggtgacaatgta
gatttaaataagccttcatctgcttgcatctgggcagagcaaggatttattaatgcttat
gatcgtgccgagaagttgtcatgtcatcttcaagatatggatgctacagcacagatgcct
gatgccatggaaataatatatcaaaccgcactcactatcgggacaagtggcgctgtagat
gagtatatggagaacaaaggtagtgcagcggcattgtactctaaagcaatggttttactt
tcatttattgtaggagaggcggcaagtcttccattgaacccaccatttacattgactcct
gccaataagaagcgaattcagacatacattaacaagttgcagactcatcaatctcagttt
ctaacagcagcaccgtttcctaagctgtctgcagacttccacaccaaatga
DBGET
integrated database retrieval system
