Gossypium hirsutum (upland cotton): 107923991
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Entry
107923991 CDS
T04793
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107923991
Membrane trafficking [BR:
ghi04131
]
Autophagy
Other autophagy associated proteins
Others
107923991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
BCAS3_WD40
ANAPC4_WD40
Ge1_WD40
Med16_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
107923991
NCBI-ProteinID:
XP_040937012
LinkDB
All DBs
Position
A11:complement(12722811..12726745)
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AA seq
420 aa
AA seq
DB search
MATLSASPSPNPNPNPNFRSPTDQTDHDPESLPQMELHPSSDQDPTPNSNRNFHAVLPTP
PEATAPAAAAAPSLLHISFNQDHGCFAAGIDHGFRIYNCDPFREIFRRDFDRGGGIGVVE
MLFRCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSEVRSVRLRRDRIVVVLEQ
KIFVYNFADLKLLHQIETIANPKGLCAVSQGAGSLVLVCPGLQKGQVRVEHYASKRTKFI
MAHDSRIVCFALSQDGQLLATASSKGTLVRIFNTVDGSLLQEVRRGADRAEIYSLAFSSN
AQWLAVSSDKGTVHVFSLKINGGSPGIDRSQSASDPVTSPHSSLSFIKGVLPKYFSSEWS
VAQFRLVEGSQYIVAFGHQKNTVVILGIDGSFYRCQFDPVNGGEMTQLEYHNFLKPEAAF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctttcagctagccctagccctaaccctaaccctaaccctaacttccgttcc
ccaacagaccaaaccgaccatgacccggaatctctacctcaaatggagcttcatccttct
tctgaccaggaccccacccccaattctaaccgtaatttccacgccgttcttccgactcca
cccgaggcgactgctcctgcagcggcggcagcgccctctcttctccacatctccttcaac
caggaccacggttgcttcgccgccgggattgatcatggcttccggatttacaattgcgat
ccattccgcgagatatttcgccgggatttcgatcgtgggggaggcatcggagtcgttgag
atgcttttccggtgcaatattttggctcttgttggcggtggacctgacccgcaataccca
cccaataaggttatgatatgggacgatcatcagagccgatgcatcggcgagctttcgttc
cgttccgaagtaagatcggttcggcttcggagggatcgaatcgtagtcgttttggaacaa
aagattttcgtctacaatttcgcggatttgaagctgttgcaccagattgagactatcgcg
aatcctaagggactctgcgcggtgtctcagggggctgggtccttggttttggtttgccct
ggattgcaaaaggggcaagttagggtggagcattacgcctccaagaggaccaagtttatc
atggctcatgattcaagaattgtgtgcttcgcgctttcgcaggacgggcagttgcttgct
accgctagctcgaaagggacgctggttcgaatttttaatactgttgatggtagcttgctg
caagaggtaagaaggggggcagatagagctgaaatttatagtttggcgttctcttcaaat
gcccagtggttagcagtttcaagtgacaaaggcacagtccatgttttcagccttaagatt
aatggtggatctccaggtattgacaggtcacaaagtgcttccgaccctgttacatcaccc
cattcctctctttcttttatcaaaggtgtgttacccaagtacttcagttcagagtggtca
gtggctcaattccgcctggttgaaggttctcagtacattgttgcttttggtcatcaaaag
aatacagtggtaattcttggcattgatggaagcttctaccgatgccaatttgacccggtg
aatggtggggaaatgacccagctggaatatcacaactttctgaagcctgaggcagctttc
taa
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