Gossypium hirsutum (upland cotton): 107924496
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Entry
107924496 CDS
T04793
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107924496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107924496
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
107924496
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
107924496
NCBI-ProteinID:
XP_016710469
UniProt:
A0A1U8LBF0
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Position
A11:complement(13096586..13100591)
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AA seq
585 aa
AA seq
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MQKKMAYSFPDEVLEQVFSFIQSDKDRNAVSLVCKSWDEIERWCRRKVFIGNCYAVSPRM
VIRRFPEVRSIKLKGKPHFADFNLVPDGWGGYVLPWIAEMAGAYPWLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLFSCEGFSTDGLAAIAASCKNLRELDLRESEVDDLSGHWLAHFP
ETCTSLVSLNISCLRSDEVSFSALERLVGRCPNLRSLRLNRAVTLDKIANILRRAPQLVD
FGTGYYAAELQPDVFSNLAGAFSSCKELKSLSGFWDVVPAYLPALYSICPRLTSLNLSYA
TIQSPDLIKLVSHCPRLQRLLVLDYVEDSGLEELASSCKDLQELRVFPSDPFGAEPNVSL
TEQGLVAVSLGCPKLRSVLYFCRRMSNAALVTIAQNRPNLTRFRLCIIEPKTPDYLTLEP
LDVGFGAIVEHCKDLRRLSLSGLLTDHVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCAVSFGACKLLGQKMPKLNVEVID
ETEPPDSRPESCPVDKLYIYRSVAGPRFDMPPFVWTMGEAVRILH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaatggcatattcgttcccagatgaagtgctggagcaggtcttctcgttc
atacaatcagataaagaccgaaacgcggtgtcgctggtgtgtaaatcgtgggacgaaatc
gaacgttggtgtcggaggaaggtgtttatcgggaactgttacgctgttagccctaggatg
gttatcaggcgattcccagaagttagatccattaagctgaaagggaaaccacactttgct
gacttcaatctggtgccagacggttggggcggttacgttcttccgtggatcgcggaaatg
gctggcgcctatccttggctcgaggagattcgacttaagcggatggtagttacggatgaa
agcttagagcttatcgctaagtcgtttaagaatttcaaagtgctggtgcttttttcttgt
gaagggttttcaactgatggacttgctgctattgctgctagttgcaagaatctgagagag
ctggacttgagggaaagtgaagtggatgatttgagtgggcattggcttgctcattttcct
gagacatgcacatccttagtgtcccttaacatttcttgcttaagatctgatgaagtaagt
ttctctgccttggagcgcctggttggtagatgtcctaacctgaggtctcttcggctcaac
cgtgcagtgacccttgataagattgccaacattttacgccgtgctccacagttggttgat
tttggcaccggttactatgcagctgagctacagcctgatgtcttctcaaacttggctgga
gctttttctagttgcaaggagctaaagagcttgtcagggttttgggatgtggtcccggct
tatcttccagctctttactctatctgccctagattaacatcgctgaacttgagctatgct
accatacaaagtcctgatctcatcaagcttgtaagccactgtccaaggttgcagcgtctt
ttggtacttgattatgttgaagatagtggccttgaagaacttgcttctagttgtaaggac
ctacaggagttacgtgtgttcccatctgacccatttggtgcagagccaaatgtatccttg
acggaacagggccttgttgctgtttctttgggttgtcctaagctacggtcagttctgtat
ttctgccgacggatgtctaatgcagcgttagtcaccattgcccagaatcgtccgaacttg
acccgttttcgtctatgtataattgagcctaaaacacctgattacctgacccttgagcca
ctcgatgttggttttggagccattgttgagcactgcaaggatctcaggcggctttccttg
tctggtctcctcacagatcatgtgtttgaatatattgggacatatgggaaaaagctagag
atgctgtccgtggcttttgcaggagatagtgatttaggactccatcatgtgctttctggc
tgtgaaagcctccgtaaactagagattagggactgccctttcggagacaaggctcttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgtgccgtgagt
ttcggagcatgtaagctgctaggtcagaagatgcccaagttgaatgttgaagttatagac
gagacagaacctccagattcaagacctgaaagctgcccagttgataagctctacatatat
aggtctgtcgctgggccgaggtttgacatgcctccttttgtgtggacaatgggtgaagca
gtgaggattctgcattga
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