Gossypium hirsutum (upland cotton): 107926234
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Entry
107926234 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107926234
Organism
ghi
Gossypium hirsutum (upland cotton)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
CDCA
SAT
Motif
Other DBs
NCBI-GeneID:
107926234
NCBI-ProteinID:
XP_040955397
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All DBs
Position
D08:1832762..1858283
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AA seq
1691 aa
AA seq
DB search
MLRLRAFRGTNDKIVKMAVHPTHPWLVTADASDYVSVWNWEHRQIIYELKAGGVDRRRLV
GAKLEKLAEGDASKGKHAEAIRGGSVKQVSFFDDDVRYWQYWRNHSAAAEAPSATNNFDC
AFRPSSIRGQHYLVVCCENKAIFLDLVTMRGRDVPKFELDNKSLLCMEFLPWLATGDSPL
VAFGGSDGVIRTLSMMTWKLAARCMGGHKGSISCMMTFLTSSGEALLISGGSDGLLIIWN
ALETHHGHGVRDLVAKLSMKAHDGGVVAIELNRVIGGSPQLITIGADKTLAIWDTNKFKE
LRRMKPVPKLACHSVASWRHPRAPNLDILTCVKDSYIWAIEHPTFSALTRPLCDLYSLIP
PLLVSTHKKLRVYCMVAHPLQPHLVATGTNVGVIVSEFDPGSLPPVTPLLMSAESRNLSA
VCILAKELKLLNFQLSNTTDPSLGNDNSLSETGNLKGDSLEPLHVAQTRKRINAPVPHDS
YSVLSVSSSGKYVAIVWPDIPYFSIYKVSNWSIVDSGSARLLAWDTCCDRFAILESTLPP
RMPIIPKGSSSRKAKEAAAAAAQAAAAAAANSASANVQVRILLDDGTSNILMRSIGSRNE
PVAGLYGGALFGIGYRTSRRATFGSAITISTIQSMPVSGFGSYDDGFSSQRSTAEAATQN
FQFFSWETCQPVGSFLPQPEWTAWDQTVEYCALAYQRYIVISTLRPQYRCLGDVAISHAT
GAVWQRRQLFVATPTTIECVFVDAGVAPIDIETRKRKEEMKLREAQARALAGHGELALIN
VDGPQTAKEEKITLRPPMLQVVRLASFQHAPSVPHFLSLPKKFKVGGDDMEERKVNEIAV
GGGGVSVAVTRFPTEQKRPVGPVIVVGVRDGVLWLIDRYMTVHALSLSHPGIRCRCLAAY
GDAVSAVKWAIRLAREHHDDLAQFLLGMGYANEALHLPGISKRLEFDLAMKSNDLKRALQ
CLLKMSNSRDMGQDNPGLDKNDILNLTAKKENLVEAVQGIVKFAKEFLDLIDAADATAQV
DIAREALKRLATAGSVKGALLGHELRGLALRLANHGELTRLSGLGTNLISLGLGREAAFA
AALLGDNAHMEKAWQDTGMLAEAVLHAHAHGRSTLKSLVEAWNKVLQKEVDHIPTAKTDA
TAAFLAVLEPKLWSLSEAGKKPPIEIFPPGMSALSSSIVIKKNSAPATQTSQQQSNKPLE
IEGPRPSGPIGAPIGAPPPSASAAVPGTPIGAPTPSAPAATQGTPVGAAPPGEAVAKQGT
PIGAPSPGATAATLGMPIGAPPPGTAAATPGTPVGAPPPDTPTATPGMAIGAPPPGTPAA
TPGMAIGAPSLGTSAGTPGMPIGAPPPSTSVATPDMPIGATPPSAAAAAPGTPIEAPPPG
TQAEISATPSRGPPTDASAATPGMVTGAPPPAAKQNTTTGASPPAETSGMTTRAPTPDAP
DATPGKPIEAPPPGAPAARPGTPIGSPSLAAPAATTGMPVGAPPTSAPAGKQSTPTEAPC
PAAPDARQGSLIGAPAATPGMSIGAPASTPSTSIRTPPPGAPAATPSTPIGAPPPNAPAA
TLGKPIGAPPPGAPAVASGTPIGSPPHGAQEATPHTSIGAPPPGAPAAAAIGAPPPISGA
SEPGSDDKAAISSSGNQHTTASVESNPTKSTNDKPADATPTDKPLADVPSLTPDNQETSV
PTTDPTSEPLA
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggctaagggcgtttcgagggaccaatgataagattgtaaagatggcagtgcat
ccaacgcatccttggttagtaaccgccgatgcctccgattatgtctccgtttggaactgg
gagcatcgtcagattatttacgagctcaaggccggtggtgttgaccgtagacgtcttgtt
ggtgctaaattggagaagcttgctgagggcgatgcttccaaagggaaacatgcagaggcc
attcgtggagggagtgttaagcaggtgagcttttttgatgatgatgtgaggtattggcaa
tattggcgtaaccattctgctgcagcggaggcgccttctgctaccaataatttcgattgt
gcctttcggccttcatcaataagaggacaacattatctcgtcgtctgttgtgaaaacaaa
gccatctttttggacctggttaccatgcgtggccgtgatgtacccaagtttgagcttgac
aacaaatcgcttctatgtatggagttccttccttggttagctacgggtgatagtcctctt
gttgcgtttggtggatctgatggtgttattaggaccctttcaatgatgacatggaagctt
gcagcaagatgcatgggggggcataaaggatcaatttcttgtatgatgacattcctgact
tcttccggtgaggcacttcttatttcaggtggtagtgatggtttacttataatttggaat
gcactcgaaacacaccatggtcatggtgtgcgagatcttgtagccaagctaagcatgaag
gcacacgacggtggagttgttgctattgagcttaatagagtgattggaggcagtcctcaa
cttattacaatcggtgcagacaagacattggctatatgggatacaaacaaatttaaggag
ttacgtcgaatgaaacctgttccaaagcttgcctgtcatagtgtggcatcttggcgtcat
cctcgagctccgaaccttgatattttgacttgtgttaaagattcatatatatgggctatt
gagcacccaactttttcagcacttacaagaccattgtgtgatctgtattcacttattcct
cctcttctagtttcaacgcataagaaactcagggtttattgcatggttgcacatccttta
caacctcatcttgttgctactgggaccaatgttggtgttattgtcagtgaatttgatcca
ggatctcttcctcctgttactcctctcctaatgtcagccgaaagtcgaaacctttctgct
gtctgcattcttgctaaggagctgaagctattaaattttcaattgtccaacacaacggat
ccatcgcttggaaatgataactctttatctgaaacaggaaatttaaagggtgattcactt
gaaccattgcatgtggctcagactagaaagcgcattaatgcacctgttcctcatgattca
tattcagttctttcagtaagcagttctggaaagtatgttgctattgtgtggcctgatatt
ccttatttctcaatctacaaggttagcaattggtccattgttgattcagggagtgcaagg
cttctggcttgggatacatgttgtgacagatttgctatattagagtctacattacctcct
agaatgccaattattcccaaaggaagttcatcaagaaaagctaaagaagcagctgcagct
gcagctcaggcagcagcagcagcagctgctaattctgcttctgctaatgttcaagtccgc
attttgctagatgatggaacatcaaacatattaatgaggtccataggtagtcgcaatgaa
ccggtcgctggcctgtatggaggggcactatttggtattggctatcgaacatctcgcagg
gctacctttggttctgcaataactatatcaacaattcagtctatgcctgtgtcgggattt
ggttcttatgatgatgggttttcttctcagagatctactgctgaggcggcgactcaaaac
tttcagtttttcagttgggaaacttgtcaaccagtaggtagttttctccctcagccagag
tggaccgcatgggaccaaaccgttgagtattgtgctcttgcttatcagcgttatattgtc
atctctacattgcgcccccagtatagatgccttggagatgttgcaattagtcatgccact
ggagcagtttggcagcggagacaattgtttgtggctacaccaactactatcgaatgtgtt
tttgtggatgctggagttgcacccattgacatagaaacaagaaagagaaaagaagagatg
aagctaagagaggcacaggcaagagcacttgctggtcatggagagttggctctaatcaat
gtagatggtccccaaactgctaaagaagaaaaaataacactgagaccacctatgttacag
gtggttcgactagcttctttccagcatgctccttctgtgccacatttcctgtcgttgcca
aagaaatttaaagttggtggggatgacatggaagaaagaaaggttaatgagatagctgtt
ggtggtggaggggtctcagtagcagttactcgttttccaactgagcaaaagcgaccagtc
ggaccagtaattgtggttggcgtgagagatggagttctttggctcattgataggtacatg
accgtgcatgctttgtccctaagccatccaggaattcgttgtcggtgtctcgctgcttat
ggagatgctgttagtgcagtgaaatgggcaattcggcttgccagggaacaccatgatgat
ttagcacaatttttgcttggaatgggatatgcgaatgaagcacttcatttacctggcata
tctaagaggttagagtttgatttagccatgaagagtaatgatttgaaacgagctcttcag
tgtcttcttaaaatgagcaacagcagggacatgggacaagataacccagggcttgataag
aatgatatccttaatctaacagctaagaaggaaaatttggttgaggctgtgcaaggcata
gtaaaattcgcaaaggagtttttggaccttattgatgcagctgatgctactgcccaggtt
gacattgctcgtgaagctcttaaaaggttagctactgcaggttcagtgaaaggagcttta
ctggggcatgagctaagaggactggctcttcgccttgcaaatcatggagagttgacacgc
ttgagtggtttaggaactaacttgatatcactcggattgggacgggaagcggcgtttgca
gctgcattattgggagataatgctcatatggaaaaggcatggcaggatactgggatgctt
gcagaggctgttttacatgcacatgctcatggacgatcaacattgaagagcctggttgag
gcttggaacaaagtgttacagaaggaggtggatcacattccaacggcaaagacagatgct
actgctgcatttctggctgttcttgagccgaaactttggagtttgtcagaagcagggaag
aaaccacctattgaaatctttcctcctgggatgtcagcactctcttcttcaattgttatt
aagaaaaattctgctcctgcaacacagacttcccagcaacaatcgaacaaaccattggaa
atagaaggaccacgtcctagtggaccaattggagcaccaataggtgcaccaccccccagt
gcatcagctgcagtaccaggcactccaataggagcaccaactccaagtgcaccagctgca
acacaaggcacaccggtaggagcagcacctcctggggaagcagttgcaaaacaaggcaca
ccaataggagcgccatctccaggtgcaacagctgcaacattgggcatgccaataggagca
ccacctcctggcacagcagctgcaacaccaggcacaccagtaggagcaccacctcccgac
acaccaactgcaacaccaggcatggcaataggagcaccacctcctggcacaccagctgca
acaccaggcatggcaataggcgcaccatctcttggtacatcagctggaacaccaggcatg
ccaataggagcaccacctcccagtacatcagttgcaacacctgacatgccaattggagca
actcctcccagtgcagcagctgcagcaccaggcacacctatagaagcaccaccacctggc
actcaagctgaaatatcagcaacgccatcaagaggaccacctactgatgcatcagctgca
actccaggcatggtgacaggagcaccacctccagcagcaaagcaaaacacaacaacagga
gcatcacctccagcagaaacatcaggcatgacaacaagagcaccaactcctgatgcacca
gatgcaacacctggcaagccaatagaagcaccacctcctggtgcaccagctgcaagacca
ggtacgccaataggttcaccatctcttgctgcgccagctgcaacaacaggcatgccagta
ggagcaccacctaccagtgcaccggccggaaaacaaagcacgccaactgaagcaccatgc
cctgctgcaccagatgcaagacaaggctcactaataggagcaccagcagcaacaccagga
atgtcaattggagcaccagcttcaacaccaagcacatcaataagaacgccacctcctggt
gcaccggccgcaacaccaagcacgccaataggagcaccacctcccaatgcaccagctgca
acactaggaaagccaattggagcaccacctcctggtgcacctgctgtagcatcagggaca
ccaataggatcaccacctcatggtgcacaagaagcaacaccacacacatctataggagca
ccacctcctggtgcacccgctgcagcagcaataggtgcaccaccacccatatcaggagca
agtgaacctggttcagatgataaagctgctatttcctcatcaggcaatcaacatacgact
gcttcagtagaaagtaatccaacaaagtctaccaatgacaaaccagcagatgcaacacca
acagataaaccattggcagatgtaccatctctaacaccagataaccaagaaacaagtgtt
ccaactacagacccaacaagtgaaccacttgcttga
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integrated database retrieval system
