Gossypium hirsutum (upland cotton): 107927943
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Entry
107927943 CDS
T04793
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107927943
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
General mRNP proteins
107927943
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
107927943
NCBI-ProteinID:
XP_016714565
UniProt:
A0A1U8LJ74
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All DBs
Position
A03:complement(112694909..112703534)
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AA seq
580 aa
AA seq
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MDFDEYEYLEKTVENPEHQKAKKEDGNGRVDNVKSEEKSRSGSSKHKREERVDDYDDYRS
YSKRSKSREESLYDHARHKERSSSRHRSQSRDGEKDRHRSSREDRVKDRDKEERNGRDKE
KERERDRKERDRERDRERGRERERERSSRSRSQSEREREMSRDREFREREKEREPRDRDR
ESRRYRDKKEDGGEAEVDPERDQRTVFAYQITLKASERDIYEFFSRAGKVRDVRLIMDRN
SRRSKGFAYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLAQSTTSVAAGQTGSH
AGGARRLYVGNLHFNITEDQLRQVFESFGTVELVQLPLDESGHSKGFGFVQFARLEDAKN
ALNLNGQLEIGGRVIKVSTVTDQGPLQDVGTNADDLDDDEGGLSLNSSSRALLMAKLDRS
GTASSITGSVGMPVNNTGLGAAPSAQPLVSPTIQASMPTIPGLPGGLQIPTNGIPTIDTI
GTPSECLLLKNMFDPSLETEPDFDLDIKEDVQEECSKFGKLKHIYVDRKSAGFVYLRFED
AQGAINAQRNLHGRWFAGKMITATYMVPQTYEAKFPDSNR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgagtatttagaaaagacggttgaaaatcctgagcatcaaaag
gcgaagaaggaagatggtaatggtagagttgataatgttaagtctgaagagaagagtcga
agtgggagttcaaagcataagagggaggagagagtcgatgattacgatgattatcgaagt
tattccaaacgttcaaaatcacgagaggaatcattgtatgatcatgcccggcataaggaa
cgaagttcttctcgtcacaggtcacagtctagagatggtgagaaggataggcacaggagt
agcagagaagatagagtcaaagacagggacaaggaggagaggaatgggagagataaagag
aaggagcgcgaacgagataggaaagagcgtgatcgtgagagggacagggaaaggggaagg
gaaagggagagagagcggtcaagtagaagcaggagtcaatcagaaagagaacgagagatg
agtcgtgaccgggagtttagagaaagagaaaaggagagagaaccaagggatcgagaccga
gagagcaggaggtacagagacaaaaaggaagatgggggagaggctgaggttgatccagaa
agggatcagagaactgtatttgcttatcagataaccttgaaggctagtgaaagagatatt
tatgagttcttctctagggctggcaaggtacgagatgttcgcctcataatggatcgaaat
tcaagacgttcgaagggatttgcgtacgttgagttctatgatgtaatgtcagtccctatg
gcaatagcactctctggccagcctcttcttggtcaaccagtgatggtgaaaccatcagaa
gctgaaaagaatcttgctcagtcaactacatctgtggcagctggacagacaggttcacat
gctggtggagcgagaaggttgtatgttggcaacctacatttcaacattacagaagatcaa
cttcgtcaggtttttgaatcttttggtactgtggagctggttcagttgccccttgatgaa
tctggtcattctaaaggttttggttttgtccagtttgcccgactggaagatgctaagaat
gcattgaatttgaatggacaactggagattggaggtcgagtaatcaaggtttcaactgtt
actgatcaaggtccattgcaagatgttgggacaaatgctgatgatcttgatgatgatgaa
ggtggcttgtctttgaattcatcatctcgagcacttctcatggcaaagttggaccgcagt
ggcactgcctcaagtattactggctccgtaggcatgcctgttaataacactggcctcggt
gctgcaccttcggcgcaaccccttgtttctcctaccatacaggcttctatgcctactatt
cctggacttccaggtggtctacaaatccctactaatggcatccctactatcgacacaatt
ggaacccctagcgaatgcctattgttgaagaatatgtttgatccaagtctcgagactgaa
cccgattttgatttggatatcaaagaagatgttcaagaagaatgttcgaaattcggaaaa
ttgaagcatatttatgtggacaggaaaagtgctggttttgtatacttacgatttgaagat
gcccaaggcgcaataaatgcgcaacggaacttacatggaagatggttcgccggaaaaatg
atcacggcaacatacatggtaccacaaacctacgaggcaaagtttccagatagtaacaga
taa
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