Gossypium hirsutum (upland cotton): 107928875
Help
Entry
107928875 CDS
T04793
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107928875
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
General mRNP proteins
107928875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
DUF1866
RRM_8
Motif
Other DBs
NCBI-GeneID:
107928875
NCBI-ProteinID:
XP_016715638
UniProt:
A0A1U8LR08
LinkDB
All DBs
Position
D01:88856..96083
Genome browser
AA seq
591 aa
AA seq
DB search
MDFDEYEYLENTVENPEPQKAKKENGNGSVDTVKSEERNRSRSSKHKRDERADGSDDYHH
PSKHSKSIEESSRDHDQRKELGSSQLSRSRDGEKDRHRSSREHRSKDKDREDRNGREREK
ERDRDRKERDRESERDRERERERERSRRSRSRSEREPDKSRDMEFREREKEREPRERDRG
IRRYKDKKEDAAEPEVDPERDQRTVFAYQISLKASERDVYEFFSRAGKVRDVRLIMDRNS
RRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSASAGQTGPYA
AGGRKLYVGNLHFNITEDQLRQVFEPFGSVELVQLPLDETGHSKGFGFVQFARLEDAKNA
LNLNGQLEIGGRVIKVSTVTDQGVSQDFGTNASAADLDDDDGGGLSLNSSSRALLMAKLD
RSGTASSIAGSVGMPANNSTGLTASTAPILGVAPSLPSLVPPTIPTSISTIPGLPGGLQL
PTNGIPVIDTIGSPSECLLLKNMFDPTLETEPEFDLDIKEDVQEECSKFGKLKHIHVDRD
SAGFVYLRFEDAQGAINAQRNLHGRWFAGKMITATYMVPQTYEAKFPSSNR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgagtatttagagaacacagttgagaatcctgagcctcaaaag
gcaaagaaagaaaatggaaatggcagcgttgatactgtcaaatctgaggagagaaatcga
agtcggagttcgaagcataagagggacgagagagctgatggttctgacgattatcatcat
ccttccaaacactcgaagtcgatagaggagtcatcacgtgatcatgaccagcgcaaggaa
ctaggctcatctcagctgtcacggtctagagatggagagaaggataggcaccgaagcagt
cgagagcacaggtccaaggacaaggatagggaggataggaatgggagggaaagagagaag
gaacgtgatcgagataggaaagagcgtgatcgtgaaagtgagagggatagagaaagggaa
agggagagagagcggtcaaggagaagcaggagccgatcggaaagagaaccagacaagagt
cgtgacatggagttcagagaaagagaaaaggagagagaaccaagggaacgagacagagga
atcaggaggtataaagacaaaaaggaagatgcggcagagcctgaggttgatccagaaagg
gatcagagaactgtatttgcttatcagatatccttgaaggctagtgaaagagacgtttat
gaattcttctctagggctggcaaggtacgagatgttcgcctcataatggatcgaaactca
agacgttctaaaggggttgggtatattgagttctatgatgttatgtctgtccctatggca
atagcactctcaggacagcctcttcttggtcaaccagtgatggtgaaaccatctgaagct
gagaagaatctagttcaatcaactacatctgcatcagctggacagactggtccatatgct
gctggcggtagaaagttgtatgttggtaacctacatttcaacattacagaagatcaactg
cgtcaggtttttgaaccttttggttctgtggagctcgttcagttgcctcttgatgaaact
ggtcattctaaaggttttggttttgtccagtttgcccgtctggaagatgcaaagaatgca
ttgaatttgaacggacagctggagattgggggtcgagtaatcaaggtatcgactgttact
gatcaaggtgtatcgcaagattttggaacaaatgcttctgctgctgatcttgatgatgat
gatggtggtggcttgtctctgaattcatcatctcgagcacttcttatggcaaagctggat
cgcagtggcactgcatcaagtattgctggctctgtaggcatgcctgctaataatagcact
ggccttactgcttcaacagcaccaattcttggagttgcaccttcattgccatcccttgtt
cctcctacaataccgacctctatttctaccattcctggacttccaggtggtcttcaactc
cctacgaatggcatccctgttattgacacaatcggaagtccaagcgaatgcctattgtta
aagaatatgtttgatccaaccctggagacggaaccagaatttgatttggatatcaaagag
gatgttcaggaagaatgtagcaagtttggaaaattgaagcatatacacgtggacagggac
agtgctggttttgtgtacttacgatttgaagatgcacaaggtgcaatcaatgcacaacgg
aacctacatgggagatggtttgctggaaaaatgatcaccgcaacatacatggtgccacaa
acttacgaggcaaagtttccaagcagcaacagatag
DBGET
integrated database retrieval system
