Gossypium hirsutum (upland cotton): 107928990
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Entry
107928990 CDS
T04793
Name
(RefSeq) PH, RCC1 and FYVE domains-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
BRX
FYVE
PH_12
BRX_N
ATG16
Mcp5_PH
DUF4686
ATG17_like
MreB_Mbl
FUT8_N_cat
HALZ
GrpE
DUF1539
DUF3818
DUF4407
MIF4G_like_2
HMMR_C
DivIVA
DASH_Spc19
Tropomyosin
DUF3573
Motif
Other DBs
NCBI-GeneID:
107928990
NCBI-ProteinID:
XP_016715794
UniProt:
A0A1U8LMN9
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All DBs
Position
D09:complement(52959776..52965305)
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AA seq
1029 aa
AA seq
DB search
MADLVRHCNSERDIEQALIALKKGTQLIKYSRKGKPKFRAFRLSPDETALIWLSHGEEKT
LKLSLVSRIVLGQRTAVFKRYLRPEKDYLSFSLLYNNSERSLDLICKDKVEAEVWLAGLK
ALIGQNRNRRTESVLSDLQEGYFVRNGPRFGTALESNNFCKVSIDFGSSDVVSERENMQM
RNNGGDGFRLSVSSTHSCASGGSAGPDDIESLGDLYVWGEVWSDGLNPDGSVSLVPAKID
VLTPKPLESNVVLDVHQIACGARHVALVTKQGEVFTWGEESGGRLGHGIEKDFSRPQLVE
VLALTTVEFVASGEYQTCAVSTAGDLFTWGDGTHNAGILGHGTDVSHWIPKRVSGALEGI
QVLSIACGAWHSALATSDGKLFTFGDGTFGVLGHGDRESVKYPKLVQMLSGLKTIKVACG
VWHTAAIVEVIGQAGVNVSSRKLFTWGDGDKHRLGHGSKETYLLPNCVSSLIDYNFHQLA
CGHTITVALTTSGHVFTMGGTAHGQLGNPNSDGKLPCLVQEKLVGEFVEEISCGAYHVAV
LTSRSEVFTWGRGANGRLGHGDVEDRKTPTLVESLKDKHVKNISCGSNFTSSICIHKWVS
GTDQSVCSGCRQAFGFTRKRHNCYNCGMVHCHACSSKKALKAALAPTPGKPHRVCDTCYA
KLKAAEAGNASNPTRKVSGLNSSIDSRERSDKFEIRPSRLLLYPTAEPAKYFEIRSGKHE
ARSNSPSLVRGSQVPSLLQLKDVAFPSSFTAIQNVLKPVPSPSPPPSPPPPPGSYSPINS
RSSSPYSRRPSPPRSATPAFSKGVMESLRKSNELLNQEVSKLQKQIKSLKQKYDSQDMEI
LKLQKSAQQSTSYATKESSKSNEAKKLVKSITDQLMEITEKLPPEVSDDETFKAIQTRAK
TFLNRLETSETYLPASLESSPMEGNTDASKWRPSESSAIRDGSEKEITEQFEPGVYITYV
YHNNGGKIFKRVRFSKRKFDEQHAGEWWSNNKDRVLMRYSPNAAKLASAVSSPTPLPADE
ETSEAAPPS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcttgttcgtcattgcaattctgagcgtgacattgagcaagcacttatcgct
ttgaaaaagggcactcaactcatcaagtatagccgtaaaggaaaacccaagtttcgtgca
tttagactctctccggatgaaacagcactaatatggttatcacatggagaagagaagaca
ctgaaattaagcttggtctctcgtatcgttcttggacaacgaactgctgtttttaaaaga
tatttgcgcccggaaaaggactacttgtcattttcgcttctatacaataacagtgaaaga
tctctcgacctgatctgcaaggacaaagttgaagccgaagtttggttagcagggctcaag
gctttgattggacagaaccgtaatagacggactgagagtgttttaagtgaccttcaagaa
ggatattttgtacgaaatggtccccgatttggtactgctctagaatcaaacaatttctgt
aaggtgtctatagatttcggaagctcagatgtggtatcagaacgtgaaaatatgcagatg
agaaataatggtggagatggtttccgacttagtgtttcaagcacgcatagctgtgcgagt
ggtggatctgcaggtccagatgatatagaatcattaggtgatctttatgtgtggggagaa
gtttggtccgatggacttaatcctgatgggtcagtaagtttagtcccagcaaaaattgat
gtgctaactcctaagcccctagaatcaaatgttgtacttgatgttcatcagatagcttgt
ggggcaagacacgttgctcttgtaacgaagcaaggtgaagttttcacttggggtgaggaa
tcgggtgggagacttggtcatggaatagagaaagactttagccgtccccagttagtcgag
gtcttggcgctaactactgtggaatttgttgcatctggagagtatcagacatgtgctgta
tccacagctggtgatttattcacttggggtgatggtacccataatgccggaatcctcggt
catggcaccgacgttagccactggattccaaaaagagtttctggtgcattagaaggtatt
caagtcttatcaatcgcatgtggcgcatggcattctgctctggcaacttctgatgggaag
ctattcacatttggagatggaacattcggtgttcttggtcatggagatcgagaaagtgtt
aaatatccgaaactagttcaaatgttaagtggactaaagacgattaaagttgcttgtggt
gtatggcatacagcagccatcgtagaagttataggccaagctggtgttaacgtatcatca
agaaagttgttcacctggggtgatggtgataaacaccggctaggtcacggaagtaaggaa
acttatctacttcctaactgcgtatcttcactaattgactacaatttccaccagctagct
tgtggacatacgataacagtcgcgcttactacatcaggacatgtctttaccatgggtggt
accgcacatggtcaactaggtaacccgaactctgatggaaagctaccatgtctggtgcaa
gaaaaacttgtaggtgaatttgttgaagaaatttcatgtggggcatatcatgttgccgtc
ttgacatcaagaagcgaagtattcacttggggaagaggtgcaaacggaagactaggacat
ggtgacgtagaagatagaaaaacaccaacattagtcgaatcattgaaggataagcatgtc
aagaatatatcatgtggctcgaatttcacttcaagtatatgcatacataaatgggtctcg
ggtaccgaccaatcagtttgctctggctgccggcaagcattcggttttactagaaagaga
cacaattgttataactgtggtatggtacattgccatgcttgtagttccaagaaagcatta
aaagcagcattggctccaacaccgggtaaaccgcaccgtgtatgcgatacttgctatgca
aaacttaaagctgcagaagctggtaatgcttcaaatccgactcggaaagttagcggtctc
aattcttccatagatagtagggaaagatcagataagttcgaaataaggccttcgaggctc
ttgctttatcccacagcagaaccagccaagtacttcgagatcaggtcaggaaaacatgag
gccagatccaattctccgtctctagtccgaggttcgcaagtaccatcacttctacaactt
aaagacgttgcatttccaagctcattcactgctattcaaaatgttttaaaacctgttcct
tctccttctcctccaccatcaccaccacctccaccgggatcttattctcctatcaactcg
agatcttcttcaccgtactccaggagaccaagccctccacgttccgccacacctgcattt
tcgaagggcgttatggaaagccttaggaaatcaaatgaacttttgaaccaagaagtatcc
aaattgcaaaaacaaatcaaaagtttgaagcagaaatatgattcacaagacatggagatt
ctgaaactacaaaaaagtgctcaacaatccacttcatatgccacaaaagaatcatccaag
tctaatgaagccaagaaactagtgaaatccatcaccgatcagttaatggaaataacagag
aagttgccacctgaagtttctgatgatgaaacctttaaagctattcaaactcgagccaaa
acgttcttaaaccgacttgaaacatctgaaacttatttgcctgcaagcttggaatcttca
cctatggaaggtaacacggatgcaagcaaatggagaccatcagagtcttcagcaattaga
gacggaagtgaaaaagaaattaccgaacaattcgaacctggagtctatatcacttacgtt
tatcacaataatggtggaaagatcttcaaacgagttagattcagtaaaaggaagtttgat
gaacaacatgcgggagaatggtggtccaacaataaagatagggtgcttatgaggtacagt
ccaaacgcggcaaaactggcttcggctgtttcatcccctactccactgccggctgatgaa
gaaaccagtgaagctgcacccccttcctag
DBGET
integrated database retrieval system
