Gossypium hirsutum (upland cotton): 107930734
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Entry
107930734 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107930734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107930734
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107930734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107930734
NCBI-ProteinID:
XP_016717938
UniProt:
A0A1U8LX04
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All DBs
Position
D10:complement(61837539..61841335)
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AA seq
304 aa
AA seq
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MPRYDDRRGSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADD
ARYSLNGRDLDGSRIIVEFAKGVPRGPGGSRDYLGRGPTPGSGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPKKLSRRPRSYSRSPSPRRGRSRSRSYSRSRSRSPVK
RERIFEREDKRSRSPKRHRGSPSPSRGRKHSPVPDERSPQEKGSPSPREGKGRLNNGSDY
SASPRGRNRSPDREADAEDKDYKNPAKEKENGQSRSPSPLPREDRSPIYDDDDNHASPRR
SESN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggtatgatgaccgccgcggcagtggtactcgcctttatgttggtcacttatcg
tcaaggacaagatcacgtgatctcgaggacatgtttagcagatacgggagaatacgtgat
gtggatatgaagcgcgactatgcatttgttgaattcagcgaccctagagatgctgatgat
gcaagatattcattgaatggtcgagacttagatggaagccgtatcattgttgaatttgcc
aagggagtgccccgtggccctggtgggtctcgtgattaccttggaagaggccctactcct
gggtcaggacgctgcttcaattgcggaattgatggtcactgggcccgtgattgcaaagct
ggggattggaagaacaagtgttatcgttgtggagaacgaggccacatagaaagaaattgt
cagaacagtcctaagaaactaagccgtagaccccgcagttactcacgctcacctagtccc
cgccgtggtagaagcagaagccgcagttacagccgcagtagatcaagatcacctgtgaag
agagaaaggattttcgagcgagaagacaaaagatcaaggagtcctaagcgccacagggga
tctccatcaccatctagggggaggaagcatagtccagtgcctgatgaaagaagcccgcaa
gagaaaggtagcccttccccaagggaaggcaagggcaggcttaacaacggttcagattac
agtgcaagtccaaggggaagaaacagaagcccagatcgtgaagctgatgctgaagacaag
gattataagaaccctgcgaaagagaaagaaaacggccagagccgcagccctagcccactc
cctagggaagaccggagccctatttatgatgatgatgataatcatgcctctcctaggcgc
agtgaatcgaattaa
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