Gossypium hirsutum (upland cotton): 107931588
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Entry
107931588 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107931588 isoform X1
KO
K15199
general transcription factor 3C polypeptide 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107931588
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
107931588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-block_TFIIIC
DUF6581
MarR_2
HTH_micro
MarR
HTH_24
Motif
Other DBs
NCBI-GeneID:
107931588
NCBI-ProteinID:
XP_016719006
UniProt:
A0A1U8LWP0
LinkDB
All DBs
Position
D04:1572173..1586409
Genome browser
AA seq
1844 aa
AA seq
DB search
MDSIITSALEEICFQGQQGISLSSLCTKLDIPPPLKASLWKNLLSIPVLRFKPRNAEFLS
PTDASIQCAEGAEKLDIIILAHETLRNNFVGLYDENVQISSQQRRTLERLAIARTNGVTQ
SQLAKEFGIEGKNFFYILKNLECRGLIVKQPALVRKKEHCSEGDSKNSSSVTTNLIYLHR
YAKRLGSQQKFEINKEEQTVETLAYGEENASDDYGFASENGKENVSVTDYLPAMKVVCDK
LEEANGKVLVVSDIKRDLGYTRSKGHKAWRNIYRRLKDAGLVEDLHAVVNEKVEFCLRLV
KSFPEKNFEPKILGCDDNLDKGQQLKFGKSILNVDQIVELPIDNQIYDMVDAEGSEGLPV
MTVCERLGIDKKRSYSRFFNMFSRFGMHLQAESHKKTTAYRVWTSGNSCKSSNAFLIKAK
NADDEKQTSNLDVGHSGVPDELNQNLLEYNPSASASDSFTPVKVNDLENDTEISCGSPGE
TNHIVLYSDNTQGLPTEQSNTACEAELDLVSTESQICAAPPQPIGLDLLRPPDSGSYQTY
SSQVLTADGARREQRMLGRLQDEKFILRPELYRWLVELEKDKSTKLDRKTVDRMLKKLQQ
QGHCKCMHINVPVVTNCGRSRITQVVLHPSVEALHPELLSEIHDRLRSFEMQVRGHATSK
LKSNDSIPVLDGVQRTLNHVDLEAKAAKLEAMRANGFVLAKMVRLKLLHRFLWGFLSSFH
GWNDVLSLERYLHGQKNLHGSCILFSLEAAIKAIPLELFVQVVGTTLKFDDMIEKCKKGF
CLSDLPIDEYRLLMDTQATGRLSLLIDILRRLKLIRLVPDECSDNRLKAPHAILTHAMEL
KPYIEEPLSLVATSTSSSLDLRPRIRHDFIFSNGEAVDDYWKTLEYCYAAADSRAALHAF
PGSAVHEVFLNRSWASVRVMTSDQRSELLKRIMKDNLHEKLSYRDCEKIGKDLNLTLEQV
LRVYYDKRQKRLNRFRGVPNGNGEQYQGERDKESSARKRKRSTVKSIEGIKADARVIQLD
EKEGGTLSDGNDEPKEDYRLASSVGPDAFQAYQEADLVEAVNKPGSHEEDEERYSLIIQN
SFLKMKPTRRKRILWTDEADRELVTQYARYRAALGAKFHRVDWTSLDGLPAPPRACARRM
TNLKRSAKFRKALMQLCNVLSERYMMHIEKRQNRSSNNSDCRLLRFSSIEHGMEHGEDVG
FEKERWDDFDDRKIKSALVDVLHFKQIAKLEASKKQKQQGPEMVLATTQDGSIGIPGAKQ
HKGSNQSLQHRFHQKLVKLWNIGNGVGRQVHESLAVSNAVELFKLVFLSISIAPPSTNLL
TETLRRYSEHDLFAAFSYLRDRKIMIGGTCGQPFVLSQQFLHSISKSPFPCNTGKRAANF
SAWIREREKDVMEGGINLTADLQCGDIFHLFSLVFSGELSVSPCLPDEGVGEAEDLRSLK
RRAEDNELCDVDKAKKLKSIAEGEFVSRREKGFPGIMVSVYSSTFPAANSLELFKDEETF
NPELLNEESSTNLDHMKEMIEFRNSVTTASKSAESPWEAMAGYTEHLLSKPSDEGQGSHF
DSEIIKAVCTEIQKAGDQGLSIEDVYGLVKMPGEKTPEIIIDTLQAFGVAKKVNAYDSVR
VVDALYHSKYFLASVSSFHRDLKTPLLLTSQAKDGGNSVQQDTKSLDAAKLLGSSSVSDV
HKVTILNLPEEHALPSNEVPTSNANEICMYGEVGLSQGDDEGMICEPFSGERLVPILPWL
NADGTINNMVYNGLIRRVLGTVMQNPGILEEDIVCQMDVLNPQSCRKLLELMILDRHLIV
KKMLQTTGSGPPALLATLVGSSCRKSKMVCREHFFANPTSTFFL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggattccatcatcacctcagctctggaagaaatatgcttccagggccagcaaggcatt
tctctttcctctctctgcaccaaactcgacatccctcctcctctcaaagcctccctttgg
aaaaatctcctctccatccccgttcttcggttcaagccgcgaaacgccgagtttcttagc
cctaccgatgcctccattcaatgcgctgaaggtgccgagaaactcgatatcataatctta
gcccatgaaacgcttagaaataacttcgttggcctttatgatgaaaatgttcaaatctca
tctcaacaacgtcgcactctggaaagactcgctattgctagaacaaatggagtgacacaa
agtcagcttgcaaaggaatttggtattgaagggaagaacttcttttatatattaaagaac
cttgaatgcagagggttgattgtgaaacaaccggcacttgttaggaagaaagaacattgc
agtgaaggggactccaaaaacagttcatctgtgaccaccaatttgatatacttgcataga
tacgcgaagcgtttgggctctcaacagaagtttgagattaataaagaagaacaaactgtt
gaaacccttgcatatggtgaagaaaatgcttctgatgactatggatttgcttcagaaaat
gggaaagaaaatgtttccgtgactgattatctacctgcaatgaaagttgtttgtgataaa
ctggaagaagccaatggaaaggttcttgttgtctcagatattaaacgagacttaggttat
acaagatccaaaggccacaaagcctggagaaacatctaccgcaggttaaaagatgctggt
ctcgtcgaggatttgcatgctgttgtcaatgagaaggttgaattttgcctaaggttggtg
aagagctttcctgaaaagaattttgagccaaaaattctcgggtgtgatgataatcttgac
aaaggacaacagctgaagtttggaaagtcaattctgaatgtagaccagattgtagagctt
cccattgataatcaaatttatgatatggtcgatgctgaaggatctgagggtttaccggtt
atgacggtatgtgagaggcttggaattgacaagaaaagaagctattctcgattctttaac
atgttctctaggtttgggatgcacctgcaagctgaaagccacaaaaagactacagcttat
cgagtttggacatctgggaattcttgtaaatcatcaaatgcatttttgattaaagcaaaa
aatgctgatgatgaaaaacagacctctaatcttgatgttggccattcaggagttcctgat
gaactgaaccaaaatcttctagagtataatccttcagcttctgcaagtgattcttttact
cccgtgaaagtgaatgatttggaaaatgatactgaaatttcctgtggctcccctggagaa
actaaccatattgttctgtattctgacaacacacaagggcttccaactgagcaaagtaat
actgcctgtgaagcagaacttgatttagttagtactgaaagtcaaatatgtgctgctcca
ccacagcctataggacttgatttgttgaggcctcctgattctggctcatatcagacatat
tcaagtcaagttctgactgctgatggtgctcgaagggagcaaaggatgcttggacgttta
caggatgagaagtttattttaagacctgaattgtatcgatggcttgtggaacttgagaag
gacaagagcacaaaattggacaggaagacggttgatcgaatgttaaagaagcttcagcaa
caagggcactgcaaatgcatgcacattaatgtgcctgttgtaactaattgtggacgaagc
cgtattactcaggtggttctgcacccgtctgttgaagcattacatccggagctgctgagt
gaaattcatgacaggttgagatcatttgaaatgcaagtccgtggccatgcaacatcgaag
ttgaaaagcaatgattcaattcctgtattagatggtgtccagagaactctgaaccatgtt
gatttagaagccaaggctgctaaattagaagccatgcgtgccaatggttttgtgctggca
aaaatggtacgcttgaaactgcttcataggtttttgtggggtttcttgagcagttttcat
ggttggaatgatgttttatcacttgagagatacctgcatggtcagaaaaatcttcatggt
tcatgcattttattttcactggaagcagccatcaaggccattccacttgaactttttgta
caagttgtgggaactactctaaagtttgatgatatgattgagaagtgtaagaaaggcttt
tgtctttctgatcttcccattgatgagtataggcttctaatggatactcaggcaactgga
agactttcactgctcattgacatcctaaggcgtttgaagttgattcggctggtacctgat
gaatgttcagataacagattaaaggcaccacatgccattttgacccatgctatggagctt
aaaccttacatagaggaaccactatcactggttgccacatctacttctagttctcttgac
cttcgtcctagaatcaggcatgatttcatcttttctaacggagaagctgttgatgactat
tggaaaactttggaatattgttatgcagctgctgattcaagagctgctttgcatgcattc
cctgggtctgctgttcacgaggttttccttaatcgatcatgggcctcagttcgagttatg
acatctgatcagcgttctgagctccttaagcgaatcatgaaggataatttacatgaaaaa
ctttcatatagagactgtgaaaagattggaaaggatcttaatctgaccttagaacaggta
cttcgtgtatattatgataagcggcaaaagcgtcttaatagatttcggggtgttccaaat
ggcaatggagagcagtatcaaggagaaagagataaagagtcatctgctcggaaaagaaag
agatcaactgtcaaatcaatagaaggaataaaagctgatgcaagagtcatacaattagat
gaaaaggagggtggtacactatctgatggaaatgatgagccaaaagaagattatcgttta
gcttcttcagtgggacctgatgccttccaagcatatcaggaagctgatctagttgaagct
gtgaataagccagggtcacatgaagaagatgaggagcgttattccttaattatccagaat
tccttcttgaaaatgaagccaacacgtagaaaaagaatcttatggacagatgaggcagac
agggaattggtaacccaatatgcaagataccgtgctgcccttggggcaaaatttcaccgt
gtagattggacttcacttgatggcctacctgcacctcctagagcttgtgcaagaagaatg
acaaacctaaaacgaagtgcaaaatttaggaaagcattaatgcaactatgcaatgtgctt
agtgaacggtatatgatgcatattgaaaaaaggcaaaataggtcatccaacaatagtgat
tgcagacttctccgattttcatcaattgaacatggaatggaacatggtgaagatgtaggc
ttcgagaaagaaagatgggatgattttgatgacagaaagataaaaagtgctttggtggat
gttcttcattttaaacagattgctaaactggaggcctctaaaaagcagaagcaacaagga
cctgaaatggttctggcaactacccaagatggaagtattggaattcctggtgctaagcaa
cataagggctctaatcaaagcttacaacaccgctttcatcaaaagttagttaagctatgg
aatataggaaatggtgttggcagacaagtacacgaatcgttggctgtttctaatgcagtt
gaactatttaagcttgttttcttgagcatatccatagcgccaccatctacaaatttgctg
acagaaactttgcgccgatattcagaacatgatctttttgcagcttttagctatcttaga
gatagaaaaattatgattggtggtacttgcggtcaaccttttgtgctttctcaacagttc
ttgcacagtatttccaagtctccatttccttgcaatacaggaaagagagctgctaatttt
tctgcttggattcgtgaaagagaaaaagatgtaatggaagggggaattaatcttactgca
gatttgcaatgtggtgatattttccacttgttttctcttgttttttctggtgagctttct
gtttccccttgcttaccagatgaaggtgttggagaagctgaagacctaagaagcttaaaa
cgtagagctgaggataatgaattgtgtgatgtagataaggctaagaaattaaaatccatt
gcagaaggtgaatttgtttcacgacgagaaaagggctttcctggtatcatggtatcggtg
tatagctcaacatttcctgcagccaattctttagaattgttcaaggatgaggaaacattc
aaccctgagcttttgaatgaggaaagttcaactaatttggaccatatgaaggaaatgatt
gagtttagaaatagtgtcactacggcatcaaagtcggctgagtcaccttgggaagctatg
gctggttacactgagcatctattgtcaaaaccttctgatgaagggcaaggcagtcacttt
gattctgagatcatcaaggctgtttgcactgaaattcagaaggctggtgaccaaggtttg
agcatagaagatgtttatggtcttgtcaaaatgccaggagaaaagacacctgaaatcatc
attgatactctccaagcatttggagtagctaaaaaggtcaatgcatatgactctgttcgt
gttgttgatgctttatatcactcgaaatattttcttgcctcagtttcaagtttccatcga
gatcttaaaacacctttgttgctaacatcccaagccaaggatggtggcaactctgtccag
caagacactaagagtcttgatgctgctaagttattgggcagctcaagtgttagtgatgtg
cacaaagttactattcttaatcttcccgaagagcacgctttaccttccaatgaagttcct
actagcaatgcaaatgaaatctgcatgtacggagaagttggtttatcacaaggggatgat
gagggtatgatttgtgagcccttttcaggtgagagattggttcctatattgccatggtta
aatgcagatgggaccatcaacaacatggtctacaatggacttatacgacgtgttcttggt
actgtgatgcaaaatcctgggatattggaggaggacattgtctgccaaatggatgtacta
aatccccagagttgtagaaagctactggaattgatgatattggatagacacctgatagtg
aaaaagatgcttcaaacaacaggtagtggtcctcctgcccttctggcaacccttgtcggg
agtagctgtagaaaatcaaagatggtgtgccgtgaacatttctttgcaaaccctacgagt
acatttttcctttag
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