Gossypium hirsutum (upland cotton): 107935078
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Entry
107935078 CDS
T04793
Name
(RefSeq) F-box/LRR-repeat protein 3 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107935078
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
107935078
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
107935078
NCBI-ProteinID:
XP_016723116
UniProt:
A0A1U8M8F6
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Position
A03:4838296..4843080
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AA seq
683 aa
AA seq
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MKTQSKRRRQPLSPDSSPNPFDILTEEIVCKILDHLHNDPFATKAFSLTCKAFYFIESRH
RRILKPLRPELLPRIFHRYPFVSHLDLSMCPRVDDTTLNVISSTWKATLQSINLSRSRFF
TNAGLSSLFVNCSGLVEVDLCNAMQLTDLAASAIAEAKNLERLSLARCKSITDMGIGCIA
VGCRKLRSLCLKWCLRVGDLGVELIALKCKQIRSLDLSYLPITEKSLNSVLQLQHLEDLV
LEGCHGIDDDGLSTLDQSCKSLKMLNLSNCQNVTHTGLSSLINGTEQLQQIILAYGSSVS
PKLPKVTSDLVKCLNAYSKLQSIKLDGCTVTWSGIKAMASLHSPVKELSLSKCLGLTDDG
LSFLVQSHKDLRKLDITCCRKITYTSIDIITNSCTSLTSLRMESCSLVPKEAFVLIGARC
SFLEELDATDNEIDDEGLKSISRCSKLSILKLGICSNISDEGLAKVGSSCSMLKEVDLYR
SVAISDAGIAAIGDGCPALEMINIAYNDKITDNSLVSLSKCRMLKALEIRGCLGVSSIGL
LAIAVGCKQLTVLDIKKCFNINDNGMLPLAQFSQNLKQINLSYCSVTDVGLVALASISRL
QNMTILHLAGLTPNGLAAALLACRALTKVKLHASFRPLLPQSILGYMEAHGCVFHWRDKA
FQVRLTEGNGSQGMEAALWKEQQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccagagcaaaaggcgacgccaaccactttcacctgattcttcacccaatccc
tttgatatattaacagaagagattgtatgcaaaatccttgaccacctccacaacgaccct
tttgccacaaaagccttctccctcacatgcaaggccttttacttcatagagtctcgacac
cggaggattctcaagcctctacgccccgagctcctccccaggatttttcatcgataccct
tttgtttcccatctcgatctctccatgtgtccgcgagttgacgacaccacgctgaacgtc
atatcctctacttggaaagctactttgcaatctattaatctgtcaagatcaaggtttttc
acgaatgccgggttatcgagcttgttcgttaattgttcgggtctggttgaggttgatttg
tgcaacgccatgcagttgactgacttggccgcatcagcaattgcagaggcgaagaatttg
gagaggttgagcttggcgaggtgcaagtcgataactgatatggggatcggctgtatagct
gttgggtgtagaaagttgaggtccctttgcttgaaatggtgcttgcgtgttggtgatttg
ggtgtggaattgattgctctcaagtgtaaacagattaggagcttggatctctcttattta
ccaatcacagagaagagcctcaactctgttcttcaactccaacatcttgaagatctggtt
ttagagggatgccatggcattgatgatgacggcctttcaacacttgatcaaagttgcaag
tcactaaagatgcttaatttgtcaaactgtcaaaatgttactcacacgggcttgtcatct
ctgataaatggtactgaacaactacagcagattatattggcatatggctcttcagtaagt
ccaaaactccctaaggttacttctgatctagtcaaatgcttgaatgcttattcaaagctg
caatcaattaaattagatggttgtactgttacttggtctgggatcaaagccatggcaagt
ttgcattccccagtcaaggaactgagcctcagtaaatgcttaggactgacagatgatggg
ctttctttccttgtccagtcacacaaagacctgaggaaactggacatcacctgctgtcgt
aaaataacttatacctctatagacatcataacaaattcatgcacctcccttacttctctc
aggatggaatcctgtagcttggttccaaaggaagcctttgttttgattggagcacgttgc
tcgtttttggaagagctggatgccacagataatgaaatcgatgacgaaggtttgaagtcc
atctcgagatgttcaaaactatctattttgaagttagggatatgctctaacatatcggat
gaaggccttgcaaaagttggaagttcttgctcaatgctcaaggaggttgatttgtacagg
tccgtggcaataagtgatgcgggcattgctgccattggtgatggttgtcctgcacttgag
atgatcaatatagcttataatgataaaattactgataattcattagtatcattgtcaaaa
tgtcggatgttaaaagcacttgagattcgtggatgccttggtgtctcatcaattggtcta
ttagccattgctgtgggatgtaagcaacttacagttcttgacataaagaagtgcttcaat
attaatgataatggaatgcttccacttgctcaattttctcaaaatctgaagcagataaac
ttgtcatattgttcggttacagatgttgggcttgtagcactagctagcatcagtcgcctg
cagaacatgacaatcttgcatttggctggtttgactccaaatggcctggcagcagctctg
ttggcatgtcgagcattaacaaaagtgaaactccatgcatcgtttagaccattacttcct
caatccatccttggatacatggaagcccatgggtgtgtctttcactggagggacaaagca
tttcaggtacgattgacagaaggaaatggatcccaagggatggaagctgcactttggaag
gagcagcagtga
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