Gossypium hirsutum (upland cotton): 107938201
Help
Entry
107938201 CDS
T04793
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00450
Selenocompound metabolism
ghi00970
Aminoacyl-tRNA biosynthesis
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107938201
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107938201
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107938201
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107938201
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
107938201
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107938201
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107938201
Prokaryotic type
Other AARSs
107938201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
107938201
NCBI-ProteinID:
XP_016726776
UniProt:
A0A1U8MIW6
LinkDB
All DBs
Position
D10:63441654..63446641
Genome browser
AA seq
610 aa
AA seq
DB search
MAVARMNMNCSIQSSLSCVLKPSYFFNFKTTQFKNRLYFPQNYLISSKRSLLCTCSGNFQ
AGEKAEPFVITTPLYYVNAPPHMGSAYSTIAADAIARFQRLLGKRVILITGTDEHGEKIA
TAASACGSSPREHCDVISQAYKMLWKDLDIAYDKFIRTTDPKHEAIVEEFYFRVLAKDDI
YRADYEGLYCVNCEEYKDEKELLKNNCCPTHLKPCVPRKEDNYFFALSKYQKPLEEILEQ
NPDFVQPSYRLNEVQGWIKNGLRDFSISRAAVEWGIPVPNDNKQTIYVWFDALLGYISAL
LEDKEQISLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLSLPKMVFGHGFLTKD
GMKMGKSLGNTIEPNELVHKFGADAVRYFFLREVEFGSDGDYSEERFVNIVNAHLANTIG
NLLNRTLGLLKKNCQSTLVVDSTIAAEGKDFKDTVEELVEKARINYENLSLSSACEAVLE
IGNAGNLYMDKHQPWSLFKQGGAASEAAAKDLVVILEAMRIIAIALSPVAPSLCRQIYAQ
LGYSEDQFDNINWSETKWGGLKGGQVMAQPKPVFARIEQIKENENGAEAAPQKVVKKKEK
KQKVQGVIEA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagcaaggatgaacatgaactgttcgatacaaagcagcctttcttgtgtatta
aaaccatcctattttttcaatttcaagactacccaattcaaaaatcgtctctatttccct
caaaattacttgatttcttcaaaaagatcattgctttgtacttgttcaggcaacttccaa
gctggtgaaaaggctgaaccttttgttattacaactcctctttattatgtcaatgcccct
cctcatatgggtagtgcttacagtactattgcggctgatgccattgccaggtttcagagg
cttttgggaaagagagtcatattaataaccgggacagatgagcacggggagaagatagct
acagcagcatctgcttgtggctccagtccaagagagcattgtgatgttatatcacaagct
tataaaatgctgtggaaagatttagatatagcttatgacaaattcattcgtacaactgat
ccgaaacatgaagcaatcgttgaggaattttattttagagttcttgctaaagatgacatt
taccgagccgactatgagggactgtactgtgtcaattgcgaggagtataaggatgagaaa
gagctgctcaaaaataattgttgtcctacgcacctaaagccatgtgttcctcgcaaagag
gataattatttctttgcattgtcgaaataccaaaaaccattagaagaaattttagaacaa
aatccagattttgttcagccttcttaccgtttgaatgaggtccaaggttggataaaaaat
ggcttaagagatttttcgatttcccgagcagctgtggaatggggtattccggttcccaat
gacaataagcaaactatatacgtttggtttgatgcacttctcggctatatctcggctctg
ttggaggataaggagcaaataagtttacaaagtgctgtttcttcaggttggcctgcctca
ttgcacttgattggaaaggatattttacgttttcatgctgtttactggccggctatgcta
atgtctgctggattgagtctcccgaagatggtgtttggccatggtttcttgacgaaggat
ggcatgaagatggggaagtcattagggaatacaatcgaaccaaatgaattggttcataaa
tttggagctgatgcagtccggtacttcttcctaagggaggtagaatttggaagtgatgga
gattattctgaggagcgttttgttaatattgtcaatgcacatcttgccaacacaatagga
aatcttctcaaccgtactcttggacttcttaagaagaactgccagtcgactttagtggtt
gattcaaccatcgcagctgaaggaaaggattttaaggataccgttgaggagctggtcgaa
aaagctcgtatcaattatgaaaatctgtccctatcatctgcttgtgaagccgtgctagag
atcggcaatgctggaaacttgtacatggataagcatcaaccatggtctctttttaagcaa
ggcggtgctgcttccgaagctgcagcaaaggatcttgtggtcatactcgaagcaatgagg
attatagcgatcgctctatcaccggtcgcacctagcttatgtaggcaaatatatgcacag
cttggctactccgaggaccagttcgataacataaactggagcgaaacaaagtggggtgga
ctaaaaggtggtcaagtgatggcacaacctaagccagtgtttgcaagaattgaacaaata
aaggaaaatgaaaatggggctgaagcagcacctcaaaaggttgtgaaaaagaaagagaaa
aagcaaaaagttcaaggggtgatagaagcctag
DBGET
integrated database retrieval system