Gossypium hirsutum (upland cotton): 107938504
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Entry
107938504 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107938504
03012 Translation factors [BR:
ghi03012
]
107938504
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107938504
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-3
107938504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
Motif
Other DBs
NCBI-GeneID:
107938504
NCBI-ProteinID:
XP_016727165
UniProt:
A0A1U8MK46
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Position
A03:113557284..113561478
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AA seq
716 aa
AA seq
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MAAEVMLMNEIEATAAQMGIDMNTDFSSIQLPPGENCGIISDDDDVYHDDQLEFDSGFGN
VIVVDNLPVVPREKFEKLEGVIRKIYSQIGVIKEDGLWMPVDPETKKTLGYCFIEYNTPQ
EAELAKEKTHGYKLDRAHIFAVNMFDDFDKYMKVPDEWAPPEIKPYTPGENLQKWLADEK
ARDQFVIRAGTDTEVLWNDARQSKTEPVYKRTFWTESFVQWSPMGTYLATVHRQGAAVWG
GANTFNRLMRYAHPQVKLIDFSPGEKFLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRD
FKGSADEFAVGGAGGVAGNSWPVFRWGGGKEDKYFAKLGKNMISVYETETFSLIDKKSLK
VENVVDFSWSPTDPIIALFVPELGGGNQPARVSLVQMPGKEELRQKNLFSISDCKMYWQS
NGDYLAVKADRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFA
VIHGDNPRPDVSFYSMRSTHNLGRVAKLTTLKGKQANALFWSPGGRFIVLAGLKGFNGQL
EFFNVDELETMATAEHFMATDVEWDPTGRYVATSVTSVHEMENGFNIWSFNGRLLYRILK
DHFFQFLWRPRPPSFLTPEKEEEIARNLKKYSKKYEAEDQDVSMLLSEQDREKRRMLKEE
WEKWVSEWRRAQEEEKLERQKLRDGEASDEEEEYEAKEVEVEEVLDVSEEVLSFEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaggtgatgctaatgaacgagatagaggcgacagcagcacaaatgggtatc
gatatgaatacagatttcagctccatccaacttcctcctggtgaaaactgtggcattatc
agtgacgatgatgatgtttaccacgatgaccaattagagtttgattccgggtttggaaac
gttatcgttgttgataatctccctgttgttcctcgtgaaaagtttgagaaactcgaggga
gttattcgaaaaatctatagtcagattggggtgattaaggaggatggcctttggatgcct
gttgatcctgagactaagaaaaccctaggttactgttttatagagtataatactccccag
gaagctgagcttgctaaggagaagactcatgggtacaagctggatagagcacatattttt
gctgttaatatgtttgatgattttgataagtacatgaaagttccggatgaatgggctcca
cctgagattaaaccctacacaccaggggaaaatcttcaaaaatggcttgctgatgaaaag
gcacgagatcaatttgtaattcgtgctggtactgatactgaggttctatggaatgatgca
aggcagtctaaaactgagcctgtttacaaacgcactttctggactgagagttttgtgcag
tggtctcccatggggacatacttggcaacggtccacaggcaaggagctgcagtttgggga
ggtgccaacacctttaatcgtctaatgcgttatgcccatcctcaggttaaacttattgat
ttttcccctggtgagaaatttttggtgacttacagcagtcatgaaccaagcaaccctcgt
gatgcaaatagggttgtgataaatatttttgacgtgagaactggaaaagtgatgagagat
tttaaaggaagcgcagacgaatttgcagttggaggagctggtggtgttgctggtaattct
tggcctgttttcaggtggggaggtggaaaggaggacaagtattttgccaaacttgggaaa
aatatgatatctgtttatgaaacagagacctttagtcttattgacaaaaaatctttgaaa
gttgagaatgttgtggacttcagttggtcaccaactgatcccattattgcactttttgtt
cctgaacttggaggaggaaaccaacctgctagagttagtctagttcaaatgcccgggaaa
gaggaattgagacagaaaaatcttttcagcatcagcgattgcaagatgtactggcaaagc
aatggcgattatcttgcggtgaaggctgatcgctatacaaaaacaaagaaaagtacgtac
accggctttgagctctttcgcatcaaagaaagggacattccaattgaagttttggaactt
gataataaaaatgataagataattgcatttgcttgggagcccaagggtcacaggtttgct
gttatacatggggataatccaaggcctgatgttagcttttactcaatgcgaagcactcac
aatttgggtcgagttgcaaagctcacaactctgaaaggcaagcaagcaaatgctcttttc
tggtcacctggtggtcgtttcatagtactcgctggattgaagggtttcaatggtcagttg
gaattcttcaatgttgatgagcttgaaactatggctactgctgaacattttatggcaaca
gatgttgaatgggatcccactggaaggtatgttgcaacttcagtgacttcggttcatgaa
atggaaaatggtttcaacatatggtcctttaatggcaggctactttatcggatactgaag
gatcatttcttccagttcttgtggcgtccaaggccaccatccttcttgacacctgagaag
gaggaagagattgcaaggaacttgaagaagtatagcaagaagtacgaggcagaggaccag
gatgtatcgatgttattgagcgagcaagatcgagagaagagaaggatgttgaaggaggaa
tgggaaaagtgggttagtgaatggaggcgggcacaagaggaagaaaaattggagaggcaa
aagttgagggatggagaagctagtgatgaagaagaagaatacgaggccaaagaagttgaa
gtagaggaagtgttggatgtgtcggaagaggtcctttcatttgaagagtga
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