Gossypium hirsutum (upland cotton): 107940426
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Entry
107940426 CDS
T04793
Name
(RefSeq) prolycopene isomerase, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107940426
Enzymes [BR:
ghi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
107940426
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
Thi4
HI0933_like
Pyr_redox_2
GDI
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
107940426
NCBI-ProteinID:
XP_016729337
UniProt:
A0A1U8MR61
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Position
A01:49181551..49185933
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AA seq
597 aa
AA seq
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MSLGCYQTILFPTKGKSGFSSWNPLKNSQLKGNKISGVEFSNFHVIQRREGIPMRLKSLL
SVDSAVEIEGKEGVNTGSKYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGF
YQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGREMEVIPDPTTVHFHLPNNLSVQVH
REYSEFINELISKFPHEKEGILKFYGECWKIFNALNSLQLKSLEEPIYLFGQFFQKPLEC
LTLAYYLPQNAGDIARKYVKDPDLLSFIDAECFIVSTVNALRTPMINAGMVLCDRHFGGI
NYPVGGVGGIAKSLAEGLIDQGSEILYKANVTNIIIDQGKAVGVKISDGREFFAQTTISN
ATRWDTFGKLLKAENLPKEEENFQKVYVKAPSFLSIHMGVKAGVLPPDTDCHHFVLEDDW
TRLEEPYGSIFLSIPTVLDSSLAPKRRHILHIFTTSPLEDWAGLPPKDYEVKKELIADEI
IGRLEKKLFPGLKSSIVFKEVGTPKTHRRYLARDMGTYGPMPRQIPKGLLGMPFNTTGIS
GLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPILDAALLGLLGWLRTLA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggttgttatcaaaccattctgttccctacaaaagggaagtcgggtttttcg
tcctggaatccattgaaaaactcacaattgaaaggtaacaagattagtggtgtcgaattc
agcaactttcacgtcattcaaaggagagaaggcattcctatgagattgaaatccctgttg
agtgtagacagtgcggtggagatagagggaaaggaaggagtcaatacggggagtaaatat
gatgcaatagttatagggtcagggataggagggcttgttgcagctacacagttggctgtt
aaaggagccaaggttttggtactggagaagtatgtgattcctggagggagttctgggttt
taccagagagatggatatactttcgatgtaggatcttctgtcatgtttggattcagtgat
aaggggaatctgaatttgataactcaagcattggctgcagtcgggcgtgagatggaggtg
attcctgatccaactacagttcatttccatctaccgaataacctttccgttcaagtacat
agagaatacagtgaatttatcaatgaacttattagtaaatttccacatgagaaggaaggg
atccttaaattttatggcgagtgttggaagatcttcaatgccttgaactcgttgcaattg
aagtccctcgaggaaccaatctacctttttggacagttctttcagaagcctcttgaatgt
ttgacacttgcttattatttgccccaaaatgctggagatattgctcgaaagtacgtgaag
gaccccgatttgttgtctttcattgatgctgagtgtttcatagtgagtacagttaatgct
ttgcggacaccaatgatcaatgcaggcatggttctatgtgacaggcatttcggtggaatt
aattaccctgttggtggtgttggtggaatagcaaagtctttggccgaaggcctgatcgat
cagggtagtgaaatactttacaaggcaaatgtgactaacattataattgaccaagggaaa
gctgtgggggtgaaaatttcggatggaagggagttctttgctcaaaccacaatatcaaat
gctactcgatgggatacatttgggaagctgttaaaagcagaaaaccttccaaaagaagaa
gaaaattttcagaaagtttatgttaaggctccatcatttctttcgattcacatgggtgtt
aaggctggcgttctgcctcctgatactgattgtcatcattttgtgctcgaggatgactgg
acgagattagaggaaccatatgggagcatcttcttaagcattccaaccgttcttgattca
tcattggctccaaaaaggcgtcatattcttcacatatttactacttctcctttagaagat
tgggcagggcttccaccaaaggactatgaggtgaaaaaggagctaatagctgatgaaatc
atcggaaggctggagaagaaactattcccgggactgaaatcatccattgtttttaaggag
gtagggaccccaaagacacacagacggtacttggctcgtgacatgggtacttatggaccg
atgcctcgtcaaattcccaagggcttattagggatgccgtttaatacaacgggtattagt
ggtctttattgtgtcggtgatagctgctttccgggacaaggcgttatagcagttgctttt
tcaggcgtaatgtgtgctcaccgggttgctgctgatattgggcttgagaagaagtctcca
atattggacgctgctcttcttggattacttggttggttaaggacattggcttaa
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