Gossypium hirsutum (upland cotton): 107943636
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Entry
107943636 CDS
T04793
Name
(RefSeq) U-box domain-containing protein 33 isoform X1
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
U-box
TCAD9
ABC1
PIP49_C
RIO1
APH
Usp
Seadorna_VP7
zf-C4H2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
107943636
NCBI-ProteinID:
XP_016732899
UniProt:
A0A1U8N4Y9
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Position
A13:complement(111002299..111006902)
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AA seq
836 aa
AA seq
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MELHNPAHRDSIPGPRFRPRVDRPANTQFPESAEETGGFNAGEKDKVFIAVGKSVERAVN
LLQWTLKRFGGKHICLLHVHQPSPLIPTLLGKLPASQANSRVLSAYRKDEKEQLKKLLEN
YSNFPRKFKVHISIVTIEANQVHKGIVQLVKRHGIRNLVMGAIPENCMSMKKSSSKSSYA
AKYVPCFCDIWFVDKGKLVWTREASEEPCLSTPASQAAVTAKSSRSNSLPHRNSDSLVHP
DNLRSNSCLTITFAASSTQLTESIVAQTDVSLSPRLSSFSNLSSPRFTNGSKCASSEMRL
SLDSYSKDEDENLYRQLGEASMEAKASKNEALAESLKRQKLELEAMEAINKIKDLESARV
HEVKLREKAEEALRATVQEREKLIKEKEEAMEELQRTTRNVTLLNGCVQEANCKHDEVAG
KLKLIQASIMTLREEKQRIRRQKLEAVRWLERWRSRGQAGATTCNGFIGIVEDLPELAEF
SLADVQTATCNFSESFKIGKGGHGCVYKGEMLGRTVAIKKLYPHNMQGQSEFQQEAQVLS
KLQHPHLVTLLGVCPEAWSLVYEYVPNGSLQDRLFRKTSVSPLTWKIRARIVAEISSALC
FLHSAKPEKIVHGDLKPENILLDSELSCKICDFGISRLVTEDNLYCPSFHCSTEPKGAFP
YSDPEFQRIGVPTPKSDIYAFGLIILQVLTRRPPVGLAGEVRKAISSGKLALILDKSAGE
WPMFVARRLVDLGLQCCESYGRDRPDLKPSLVRELGQLHVTEERPVPSFFLCPILQEIMH
DPQVAADGFTYEGEALRGWLENGRETSPMTNLKLSHLHLTPNHAIRQAIQNWLCKA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcacaacccagctcaccgagactcaattccggggccgcgtttcaggccacga
gttgaccgtccggcgaatacccagttcccggaatcagctgaggaaaccggaggctttaac
gccggtgaaaaagacaaagtgtttatagcggtgggaaaatcggttgagagagcggttaat
ttattacaatggacgttgaagcgatttggcggtaaacatatttgtttgcttcatgttcat
cagccttctccattaatccccactttattggggaaacttccagcaagtcaagccaatagt
cgagtcctttctgcatatagaaaggacgagaaggaacaattgaagaaacttttggaaaat
tactcaaattttccccggaaatttaaggttcatataagcattgtcaccattgaggctaac
caagttcataaaggaattgtccaactagtcaagagacacgggattaggaaccttgttatg
ggagccatacctgaaaattgcatgagtatgaaaaagagctccagcaaatctagttatgct
gcaaagtatgttccctgcttttgcgatatatggtttgtcgataaagggaaacttgtttgg
acgagggaagcctctgaagaaccgtgtttgtctacaccagccagtcaagcggctgttact
gcaaaatcttcgaggtctaactcactgccccatcgtaacagtgattcattagtccaccct
gacaatcttcgttctaactcttgtttgaccataacgtttgctgcaagtagtacccaattg
accgagagtatagtggcacaaacggacgtgtctctttcaccgaggttatctagcttcagc
aatttgtctagcccaagatttactaatggctccaaatgtgcttcttctgaaatgagattg
tctttagattcttattcaaaggatgaggatgaaaatctgtaccgtcagcttggagaagcg
agtatggaagctaaggcatcaaagaatgaagcattagcggagtcgttaaaacgccaaaaa
ctggagttggaagctatggaagctatcaacaagatcaaagatctcgaatctgcccgtgtt
catgaagtcaagcttagagagaaagccgaggaagcccttagagctaccgtgcaagaacga
gaaaagctcataaaagagaaagaagaagcaatggaagagctacagaggaccacaagaaac
gtcaccctactaaacggttgtgtacaagaagcgaattgtaaacatgatgaagttgctggc
aaattgaaactaatccaagcatctatcatgactttgcgagaggaaaagcagagaatcaga
cgacaaaaactagaagccgttcgttggttagaacgttggagaagtcgcgggcaagctgga
gccactacttgtaatggtttcatcgggatagtcgaagatttgcccgagttagctgaattt
tcattggcagatgtccaaaccgcaacgtgcaatttctctgaaagcttcaaaattggaaag
ggaggacacggttgtgtttacaagggggaaatgctgggtcgaactgtggctataaagaag
ctgtatccgcacaacatgcaagggcaatctgagtttcaacaggaggctcaagttctcagc
aagttacaacatcctcatttggtaactttgctcggtgtatgccccgaagcctggtccctg
gtttatgagtatgtgcccaatggaagtctccaagatcggcttttccggaaaacaagtgtt
tctcccttgacttggaagattcgagcacggatagtagccgaaatctccagtgctctttgc
tttctgcactctgccaaaccggaaaagatagtccatggtgatttgaaacccgaaaacatt
cttcttgattcagaactaagttgcaagatttgcgattttggtatctcgaggttggtcacg
gaggataatctatattgcccgagtttccattgtagtacagagccaaagggtgctttccca
tattcggatccagaatttcagaggataggtgtcccgactcctaagtccgacatttatgcc
tttgggttgatcattctacaggtgctcactagaaggccaccagttgggttagccggtgag
gttcgaaaagccatatcgagcggtaaattagctttgatacttgataaatcagctggagaa
tggcctatgttcgtggcaagacgtttggttgatctggggctacaatgctgtgaatcgtac
ggtagggatcggcctgatctaaaaccatctctggtgagggaactagggcagttgcatgtc
acagaggaacgaccagtgccgtctttctttttatgccccattcttcaggaaataatgcac
gaccctcaagtggcggccgatgggttcacatacgaaggtgaagccttgcgtggctggttg
gaaaatggccgtgaaacttcaccgatgactaatttgaagttgagtcatttgcatcttact
ccgaaccacgccatacgtcaagccattcaaaactggctttgcaaagcttga
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