Gossypium hirsutum (upland cotton): 107944273
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Entry
107944273 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC107944273
Organism
ghi
Gossypium hirsutum (upland cotton)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
B_lectin
S_locus_glycop
PAN_2
APH
Haspin_kinase
PAN_1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
107944273
NCBI-ProteinID:
XP_040943766
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All DBs
Position
D01:2914893..2933519
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AA seq
1720 aa
AA seq
DB search
MSMVSGYMSPEYAMQGQFSEKSDVFSYGVLLLEIVSGRRNTSFYNNKDDLNLLGYAWRLW
REGNIWRLVDEVIFELESDSNNEKEIWRCIHVGLLCVQEYTKDRPTISTVISMLNSEISD
LNTPKQPAFTQAPLMSHNVEDRGSLNDVTSKYWGEITGKTINRAVLLALISCFYLLFATA
LNTITPSKSIKDPDVIISQNGVFRLGFFSLANSSNRYVGQIETGLSKTLLGFSPYQMMAI
LLFPMEKLKFFGHRMLPIQFLIVQLLASGNLVLSNGDDGASSLWESFEDPSNAFIETMKI
STDVKKGRKVELKSWKSIDDPSDGNFSLGFEPFNIPEGIIRKKNQLYFRTGPWNGYTFIG
LINMYTSYLQGFVVVADNPQQPYCMTHEFYTDSILIYGELDSQGKFIERRWDAGKGNWIN
NCLKRFKPRNIEEWSRGNWSSGCFRTTPLQCQRDNNNGSGAGQGDDGFLEMKNMKVPVFR
HPSSVSNGECKDQCMKNCSCVTYAYDDGIGCMLWSGDLIDISPLAESIFTFVCHLRNSLP
LINFKELATATNNFNHAKKLGQGGFGPVYKGTLHAEKEIAVKRFSKASGKGLEEFMNEVG
VTSKLQHRNLVRLLGCCVEEENMLVYEYMPNKSLDVFLFDPAKQDVLDWRKRFNIIKGIK
QGLLYLHRYSRLRIIHRDLKVNNILLDEELNPKILDFGMARXFGGSENXANTKRVVGNTI
TPSKSIKDPDVIISQNGVFRLGFFSLANSSNRYVGILYNQIPVQTVLLDSGNLVLNNGDN
GGSSSLWESFQHPSNVFLQTMKMGVDVKTGRKVHTRPWKGPDDPSDGNFSQGLEPFNNPE
GVIRNNNQIYFRTGPWNGHIYIGLIHMNSVYLDGLYVVADDEGKSYYETFEYSNKSMLTY
YELNYEGRFVQRNWDAGKGDWINSCHMLQNDCDFYGKCGAFGICDPTKQPICSCSKGFKP
RNAEEWSRGNWSSGCFRTTALQCQRDNNNGSGGAGQSDDGFLKLKTMKAPAFPDQSSIIN
GECKDQCMKNCSCVAYAYDAGIGCMFWSADLIDVQKFPTRGVDLYIRLSSSELDKGKSSK
VIVITTVTAGIVVITISALFLWCGMAKQRGTNKRHKQIKHKSYSENVGESSIGVKLQQLP
LFNFQELATATNNFHPEKKLGQGGFGPVYKGTLEDGKEIAVKRLSKASGQGLEEFMNEVV
VISKLQHRNLVRLFGCCVEAEEKILVYELMPNKSLNAFLFDPVKQRLLDWRKRFNIIEGI
SRGLLYLHRDSRLRIIHRDLKASNVLLDQDLNPKISDFGMARIFGGDENQANTKRVVGTY
GYMSPEYAMQGQFSEKSDVFSFGVLLLEIVSGRRNTSFYNNKDDLSLLGYAWKLWREGNI
WGLVDEVILESKSDSNNEKEIWRCIHVGLLCVQEYTKDRPTISTVISMLNSEISDLNTPK
QPAFTQAPLMSHNVENRGSLNDVTSKHITPSKSIKDPDVIISQNGVFRLGFFSLANSSNR
YVGILYNQIPVQTVVWVADRNRPLKDSSGILTISDDGNLLLDSGNLVLSNGDDGASSLWE
SFEYPFNAFIETMKISTDVKKGRKVELKSWKSIDDPSDDSQGNFIERRWDNGKGNWINKY
SSYQTDCDVYGYCGAFGICDSSKQPICSCLKRFKPRNIEEWSRGNWSSGCFRTTPLHCQR
DNNNGSGAGQDDDGFLDMKNMKVPASPHPSSVTASAKISA
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggtcagtggttatatgtctcctgagtatgcaatgcaagggcaattttcagag
aaatcagatgtgttcagctatggagttctactactagagattgttagtggaagaagaaac
acaagcttttacaacaataaggatgacctcaacctcttgggatatgcatggagattatgg
agggaaggcaatatttggcgattagtagacgaggtgatttttgagttggaatcagattca
aataatgaaaaagaaatatggagatgtatacatgtcggattgctatgcgttcaagaatat
actaaagataggcccactatatctactgttatttcaatgcttaatagtgagatttcagat
cttaacactccaaagcaacctgctttcactcaagcaccactaatgagccataatgttgaa
gatagaggttcacttaatgatgtcacttccaagtactggggagagatcacgggaaaaact
atcaaccgcgccgttttactagctttaatatcttgcttttacttactatttgccactgct
ttaaacaccataacaccatcaaaatccatcaaagaccctgatgttataatctcccagaat
ggtgttttccgattgggattcttcagcttggctaactccagcaatcgttatgtagggcaa
atagaaacaggcctctcaaagactcttctgggattctcaccatatcagatgatggcaatc
ttgttgtttccaatggaaaagctgaaattctttggtcatcgaatgttaccaatacagttc
ctaattgtccagcttttagcctctggaaacctcgtcctcagtaatggtgatgatggagca
agcagcttgtgggagagttttgaagatccttctaatgccttcattgaaactatgaagatc
agcactgatgttaaaaagggtcgtaaagtggagctgaaatcatggaaaagcattgatgat
ccatctgatggtaacttttctcttggttttgaacctttcaacatcccagagggcatcatt
cggaagaaaaaccagctctattttcggaccggtccatggaatgggtatacctttattggc
ttaataaatatgtacacctcttatcttcaagggtttgttgttgttgcagataacccacaa
cagccttactgtatgactcatgaattttatactgactctatattgatatacggtgaatta
gattctcaaggaaaattcattgaacggagatgggatgctgggaaagggaactggataaac
aattgcttaaagaggtttaagcctaggaatatagaggaatggagtagaggtaattggagt
agtggatgttttaggactacccctttgcagtgccaaagagataacaacaatggcagtgga
gcaggccaaggtgatgatggctttttggagatgaagaatatgaaagtgccggtatttcgg
cacccgtcatcagtaagtaacggcgagtgcaaagatcagtgcatgaagaattgttcgtgc
gtgacttatgcgtatgatgatggcattggttgcatgttgtggagtggagatttgattgat
atttctccactagcggagtcgatctttacattcgtctgccatcttcggaactcgctgcca
ctaatcaatttcaaagaacttgccaccgcgacaaacaacttcaatcacgcaaaaaagcta
gggcagggtggtttcggtccagtttacaagggaacattacatgctgaaaaggaaatagca
gtaaagagattctcgaaagcttcggggaaaggattggaagaatttatgaatgaagtgggg
gtgacctctaagcttcaacatcgaaatctggttagattgcttggctgttgtgttgaagaa
gagaatatgcttgtctacgaatatatgcccaacaaaagtttggacgtttttctcttcgat
ccagctaaacaagatgttttggattggagaaaacgcttcaacattattaaagggattaag
caaggattgctttatcttcatagatattcaagactaaggattatacatagagatttaaaa
gtaaataatattttactcgacgaagaattaaacccaaaaattttggattttgggatggca
agantttttggaggtagtgaaaattaagccaacactaaaagggttgttggaaacacaata
acaccatcaaaatccatcaaagaccctgatgttataatctcccagaatggtgttttccga
ttgggattcttcagcttggctaactccagcaatcgttatgtagggattctctacaatcaa
atccccgtacaaactgttcttttagactctggaaatcttgtcctcaataacggcgacaat
ggaggaagcagcagcttatgggagagttttcaacacccttctaatgtattccttcaaact
atgaagatgggcgttgatgtaaaaacgggtcgtaaggtgcatacgagaccatggaaaggc
cctgatgatccatctgatggtaacttttctcaaggccttgaacctttcaacaacccagag
ggtgtcattcggaacaataaccagatatattttcggactggcccatggaatggccatatc
tatattggtttaatacatatgaattccgtttatcttgatgggctttatgtggttgcagat
gatgaaggaaaaagttattatgaaactttcgaatattctaataagtctatgttgacatac
tatgaattaaattatgaaggaagattcgttcaacgaaactgggatgcggggaaaggggac
tggataaacagttgccatatgcttcaaaatgattgtgatttttatgggaagtgtggggca
ttcggaatctgcgatccaacgaaacaacccatttgcagttgctcaaagggatttaagcct
aggaatgcagaggaatggagtagaggtaattggagtagtgggtgttttaggactaccgct
ttgcagtgccaaagagataacaacaatggcagtggaggagcaggccaaagtgatgatggg
tttttgaagctgaagacgatgaaagcaccggcttttccagaccagtcatcaataattaac
ggcgaatgcaaagatcaatgcatgaagaattgttcgtgtgtggcttatgcatatgatgct
ggcattggttgcatgttttggagtgcagatttgattgatgtccagaaattccccactcgc
ggagtcgatctttacattcgtctgtcatcttcggaacttgataaagggaaaagtagtaag
gtcattgttattacaacagtaactgcgggcatagtcgttattacaatttctgcactcttc
ctatggtgtgggatggctaaacaaagaggaacgaataaaaggcacaaacagatcaaacac
aaatcttatagtgaaaatgtaggagaaagttcaatcggtgttaaactccagcaactgcca
ctattcaatttccaagaacttgccaccgcgaccaacaacttccatcccgaaaaaaagcta
gggcagggtggttttggtccggtttacaagggaacattagaagatggaaaagaaatagca
gtgaagagattgtcaaaagcttcggggcaaggattggaagaatttatgaacgaagtggtg
gttatttcaaagctccaacatcgaaatctggttagattatttgggtgttgtgttgaagca
gaagagaagatacttgtctatgagctcatgcccaataaaagtttgaatgcttttctattt
gatcctgttaaacaaagactcttggattggagaaaacgcttcaacattattgaagggatc
agtcgaggattgctttatcttcatagagattcaagattaaggattatacatagagatcta
aaagcaagtaatgttttacttgaccaagatttaaatccaaaaatttcagattttgggatg
gctaggatcttcggaggtgacgaaaatcaagccaatactaaaagggttgttggaacttat
ggttatatgtctcctgagtatgcaatgcaagggcaattttcagagaaatcagatgtgttc
agctttggagttctactactagagattgttagtggaagaagaaacacaagcttttacaac
aataaggatgacctcagcctcttgggatatgcatggaaattatggagggaaggcaatatt
tggggcttagtagacgaggtgattttagagtcgaaatcagattcaaataatgaaaaagaa
atatggagatgcatacatgttggattgctatgcgttcaagaatatactaaagataggccc
actatatctactgttatttcaatgcttaatagtgagatttcagatcttaacactccaaag
caacctgctttcactcaagcaccactaatgagccataatgttgaaaatagaggttcactt
aatgatgttacttccaaacacataacaccatcaaaatccatcaaagaccctgatgttata
atctcccagaatggtgttttccgattgggattcttcagcttggctaactccagcaatcgt
tatgtagggatactctacaatcaaatccccgtacaaactgttgtatgggtagcagataga
aacaggcctctcaaagactcttctgggattctcaccatatcagatgacggcaaccttctt
ttagactctggaaacctcgtcctcagtaatggtgatgatggagcaagcagcttatgggag
agttttgaatatccttttaatgccttcattgaaactatgaagattagcactgatgttaaa
aagggtcgtaaagtggagctgaaatcatggaaaagcattgatgatccatctgatgattct
caaggaaattttattgaacggagatgggataatgggaaagggaactggataaacaagtac
tctagttatcaaacagattgtgatgtttatggatactgtggagcatttggaatatgcgat
tcatcgaaacaacccatttgcagttgcttaaagaggtttaagcctaggaatatagaggaa
tggagtagaggtaattggagtagtggatgttttaggactacccctttgcactgccaaaga
gataacaacaatggcagtggagcaggccaagatgatgatgggtttttggacatgaagaat
atgaaagtgccggcatctccgcacccgtcatcagtaacggcgagtgcaaagatcagtgca
tga
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