KEGG   Gossypium hirsutum (upland cotton): 107946459
Entry
107946459         CDS       T04793                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107946459
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107946459
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 107946459
NCBI-ProteinID: XP_016736283
UniProt: A0A1U8NEA2
LinkDB
Position
D12:complement(51749164..51753162)
AA seq 592 aa
MAAENSSSKSASTADSYIGSLISLTSKSEIRYEGVLYNINPDESSIGLRNVRSFGTEGRK
KDGPQVPPSDKVYEYILFRGSDIKDLQVKSSPPTQPTPPINNDPAIIQSHFPHSVSTTTS
MPSAASGPLTDLTSHNTQMGLAGFNFQAALPLYQPGGNIGSWGASPQPPTANGSGLAMPM
YWQGYYAPPNALPHLHQQTLLRPSPGLSVPPSMPQPMQYPNFNASLPAGSANLHSSSLPE
IPPSLLPASTSSHMLTSSSLSFATSSSLPPAPSATLASETLSASLPNKAPSPAPPPATLS
ASSPALAPLTSSSPELHSIAPPIANKRSEIPTLPYQSASEVASSVIGVSNSIHVETSTPS
LVTPGQLLQSGSTVVPSSQPAATAHKDVEVVQVSSSLSPEPSVPVVSEAQPPLLPLPVSS
HVAPKPNGASFQPRYGYRGYERGRGRGTGSSRPVTKFTEDFDFVAMNEKFKKDEVWGHLG
NSSKSHTKDKEADAVEEYGSQDEDDAEISKIQTKPVYNKDDFFDTLSCNALDSDLQNGRP
RFSEQMKLDTETFGDFSRHRGGRGRGRGRGRGGRFRGGYYGRGYGYVGRGRG
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggcggcggagaattcaagttcgaaatcggcttcaacggctgattcctacatagggagc
ttaataagcttgacttccaagagtgagatcagatacgagggcgttctttacaacatcaac
ccggacgagtccagtattggattaagaaacgtacgatcatttggaactgaaggaaggaaa
aaggatggtccgcaagtacccccgagtgacaaagtttatgaatacatattgttccgtggg
agtgacattaaggatttacaggttaaatcttcaccacctacacagcctaccccgcccata
aacaatgatcctgcaattatccagtctcactttccacactcagtttcaacaactacaagc
atgccatctgctgctagtggacctttgactgatcttacttcacacaacactcaaatggga
ttagcggggtttaattttcaagcagcactacctctatatcaacctggtgggaacataggg
tcatggggtgcatcacctcaacctccaactgctaatggtagtgggcttgctatgcccatg
tattggcaaggatactatgcccccccaaatgcgcttccacatttgcaccagcaaactttg
cttcggccatcaccaggactgtcagtgcctccttcaatgccgcaaccaatgcaatatcct
aattttaatgcttctttgcctgctggctctgctaacttacatagttcaagcttgcctgaa
attcctccttctttacttcctgccagtacgagttcccacatgttaacatcttcttcttta
tcattcgccacttcatcttctctgcctcctgcaccctctgctacgctggcatcagaaacc
ttgtctgcttccttgcctaacaaagctccaagtcccgcacctcctccagctacactcagt
gccagctcgcccgcacttgctcctttgacgagttctagtccagaattacattccattgca
ccaccaattgccaacaaacgaagtgaaattcctactttgccatatcaaagtgcttctgag
gttgcatcctctgtcatcggggtttcaaattctattcatgtggaaacatctacaccatca
ttggtaacccctggtcagctcttgcagtcaggatctactgttgttccttcatctcagcct
gcagcaactgcacataaagatgtggaagtggttcaagtgtcctcatcattatcgcctgaa
ccatcagtacctgttgtctcagaagctcagcctccattattgccattacctgtttcttca
catgttgccccaaagccaaatggagcttcctttcaacctcgctatggttatagaggatat
gaaagaggaagaggaagaggaactgggagttcacgtccagtgacaaaatttactgaagac
tttgattttgtggcaatgaatgagaaattcaagaaagatgaagtatggggtcatcttggt
aacagtagcaaatctcatactaaggataaagaagcagatgccgttgaagaatatggttct
caagatgaagatgatgctgaaatatctaagattcaaacgaagcctgtttacaataaggat
gacttttttgatactctctcctgcaatgcacttgatagtgacttgcaaaacggaaggccg
agattctctgagcaaatgaagttagacacagagacttttggtgatttttcaagacatcga
ggtggacgtgggcgtggacgtggacgtggacgtggtggtcgttttcgtggtgggtattat
ggaagagggtatggatatgtggggaggggtcgtgggtaa

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