KEGG   Gossypium hirsutum (upland cotton): 107948689
Entry
107948689         CDS       T04793                                 
Name
(RefSeq) protein RRC1 isoform X1
  KO
K12842  U2-associated protein SR140
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107948689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107948689
Spliceosome [BR:ghi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107948689
 Complex B
    107948689
SSDB
Motif
Pfam: Surp RRM_1 CID CTK3 RRM_7
Other DBs
NCBI-GeneID: 107948689
NCBI-ProteinID: XP_016738802
UniProt: A0A1U8NI88
LinkDB
Position
A08:127365748..127373472
AA seq 971 aa
MSSFSITRKKTPFQKHREEEEAKKKREEDETARLYEEFVASFQGDNAPGSKAFVRGGTIN
PNEKFKPDSAGEKSKDGVSVAKKGSRYVPSFIPPPLAAKGKESEKKKEEEKPKEREKGKS
RNIDHFMEELKHEQEMRERRNQDREHWRDGRHSDNSAPSSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSMEGSSIILSGPS
GPPVTSVPNQNSELVLTPNVPDIMVTPPDGDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GNPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTTRSP
EHEKDYTATYAAGRSRRLEPERTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESF
NDLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRSTFLRSGNSGVAPFHSIC
GNAPAIENKISSEDAVNGIKANQDAALAMGKGAAMKELMDLPLAELERRCRHNGLSLVGG
REIMVARLLSLEDAEKQRNYELDDELKFRSSSSRYLSGQRGANAEPESVGLSEWTCFGED
EIHSEHKVSVPLAETFPVPQPELKIFTKKDKTDPVLPASKWAREDDDSDDEEKRSTRLSS
GSETAGDGPSKADELEFGTHMNTSAPSESAINEEQRKKLRRLEVALIEYRESLEERGTKN
AEDIERRVAVHRKRIESEYGLTDSGEDTSGRKRRDRRDDARDSASKRHRSESRSESPPWK
SSNRDRDRENGSEKEQEMLRDRDRDRSRGQELESERGRERERDYREKSGSRERDDHDRDR
GRERDRRRRMN
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgagttcattttcgatcacacgcaagaaaacgcctttccagaagcacagagaagaggag
gaagccaagaagaagagggaggaggatgaaactgctcggttatacgaggagttcgtggct
tcttttcaaggagacaatgcacctgggtcaaaggcatttgttcgaggcggaacaatcaat
cccaatgagaaattcaagcccgattctgcaggtgaaaagtccaaagatggggtgtctgtt
gcaaagaagggaagtaggtatgttccatctttcataccacctcctttggcggccaaggga
aaggaatctgagaagaagaaggaggaggagaagccaaaggaaagagagaaggggaagtct
cggaacattgatcattttatggaggagctgaagcatgaacaagaaatgagggagagaaga
aatcaggatcgcgaacattggcgcgatgggcgtcatagtgacaattcagctccatccagt
cgctttgatgaactccctgatgattttgatcctagtggaaaactgcctggatcgtttgat
gatggtgatcctcaaacaacaaatctttatgttggaaatctctcaccaaaggtggatgaa
aattttcttcttcggacttttggaagatttgggcctattgctagtgtgaagattatgtgg
cctaggacagaggaagagcggcggcggcaaagaaattgtggctttgtagctttcatgaat
agagctgatggacaagctgcaaaagatgaaatgcaaggagttgttgtatatgaatatgag
ttgaaaatcgggtggggtaaatctgttgctcttccatcacaagcattacctgctccccca
cctggacacatggccatcaggagtatggagggtagttctataatcttatctggtccttcg
ggcccacctgtgacatctgttccaaatcagaactctgaattggttcttactccaaatgtt
ccagatataatggttaccccccctgatggtgaccatcttcgccatgtcatcgatacaatg
gctctttatgttcttgatggaggatgtgcttttgaacaagctattatggagaggggtcgt
ggcaatcctctattcagctttttgtttgagcttggctcaaaggaacatacttactatgtc
tggagattatattctttcgctcagggtgatacacttcaaaggtggcggacggagcctttt
atcatgataactggtagtggaagatgggtaccacctcctctgccaactacaagaagtcca
gagcatgaaaaggactacactgccacatatgctgcaggaagaagcaggcggctggagcca
gaacgaacacttactgatcctcaaagggatgaatttgaggatatgctacgggccttgact
ttagagaggagtcagattaaggaagctatgggatttgctttggataatgctgatgctgct
ggggagatagttgaagttttgacagagtccttgacacttaaagagacaccaattccaact
aaagttgcaaggcttatgctcgtctctgacatccttcataacagcagtgctcctgttaaa
aatgcatctgcataccgtaccaaatttgaagcaacgttgcctgatataatggagagcttt
aatgatttgtaccgcagtgtgacgggaaggatcacagccgaggcccttaaggaaagggtt
ctgaaagtgttgcaagtatggtcagactggtttcttttttcagatgcatatgtgaatgga
ctgcgatctacttttcttcgatcaggaaactctggtgtggccccttttcattctatatgt
ggtaatgctccagcaattgaaaataagattagttcagaagatgcagttaatgggattaag
gccaatcaagatgctgctttggcaatgggcaaaggtgcagctatgaaggagctaatggat
ctcccacttgctgagctggaaagacgttgtagacataatggattgtctcttgttggtggt
agagaaataatggttgctcgacttttaagtttggaagatgcagaaaagcagaggaattat
gaactagatgatgagctgaagtttcgatctagttctagtaggtatcttagtggtcagaga
ggtgcaaatgctgagccagagtctgtgggattgtctgaatggacctgttttggagaggat
gagatccattcagaacacaaagtttctgtacctttggctgaaacctttccagtcccacag
cctgaactaaaaatattcacgaagaaagataaaacggatcctgttttgccagcctctaaa
tgggctagagaggatgatgacagtgatgatgaagaaaagagaagcactcggttgtcttct
ggaagtgagactgctggtgatggccctagtaaggctgatgaattggagtttggaactcat
atgaatacttcagctccatctgaaagtgcaatcaatgaagagcagaggaaaaagttgaga
cgtttggaggttgctttgatagaatatcgagaatcccttgaggagcggggaactaaaaat
gccgaggatattgagagaagggttgctgttcaccgaaaacggatagaatctgaatatggt
ttaacagattctggtgaagatacttcaggaagaaagaggagagataggcgggatgatgca
cgtgactctgcaagcaagcggcatcgcagtgaaagccgaagtgagagccctccgtggaaa
tcatcaaacagagacagggatagagaaaatggttcagaaaaggaacaagaaatgctcagg
gatagagatagggatagaagtagaggtcaagaactggaaagtgaaagggggagagaaagg
gagcgagactatcgtgaaaagagtggaagcagggaaagggatgatcatgacagggataga
ggcagagagagggataggagaaggcgaatgaattga

DBGET integrated database retrieval system