Gossypium hirsutum (upland cotton): 107949720
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Entry
107949720 CDS
T04793
Name
(RefSeq) leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_4
LRR_1
LRR_8
LRR_6
ABC1
SARAF
APH
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
107949720
NCBI-ProteinID:
XP_016739954
UniProt:
A0A1U8NPS9
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Position
D03:41108817..41111044
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AA seq
639 aa
AA seq
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MAFSPGIPHRRRHFLRFLTLLSLLFISHSRLTLDRSDSKALSTLLKDLGIASQRFPATDP
CSAAGVFCERRLADDDTYVLKVTRLVFNSQMLDGSLSPAIGKLSELKELSVSHNRIGNPF
PHEVVHCKKLEILDLQNNKFSGEIPSNLSSLVHLRVLDLSSNKFTGDLTFLKYFPNLENL
SLANNLFSGKIPSSIRSFRNLRFFDFSGNNFLEGSAPLMSQIDESTVSQYPKRYTFAERK
STNNSRSRAQAPSPIGSKSVTGEGPSSSPVTQHRHKNKSKKAMEWLLGFFSGAVGGGIFG
FVFSVMFKLVLATILGAAKDPGPSIFSPLIKKAEDLSFLEKEDGLASLEIIGKGGCGEVY
KAELPGSDGKMIAIKKIIQPPKDAAELTDEDSKLLNKKMRQIKSEITTVGQIRHRNLLPL
LAHISRPDCHYLVYEFMKNGSLQDILQQVSEGTRELDWLARQRIAKGVAAGLEYLHMHHS
PRIIHRDLKPGNILLDDEMEARIADFGLAKAMPDAQTHITTSNLAGTVGYIAPEYHQTLK
FTDKCDIYSFGVILSVLVMGKLPSDTFFQHTDEMSLVKWMRNIMISDNPTTAIDPKLIGK
GFEDQMILVLKIAYFCTLDDPKERPNSKDVRCMLSQIKS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctctcccggaataccccaccgtcgtcgtcacttccttcgcttcctcactctc
ctctctctcctcttcatctcccattcaaggctaactctcgaccgttcagactccaaagct
ctttccacacttctcaaagacttgggcatcgccagtcaacggttccccgccactgatcct
tgcagcgccgccggcgttttctgcgagagaagactcgccgacgacgacacttatgtcctt
aaagtcaccaggcttgtatttaattcccaaatgcttgatgggtctctgtctcctgcaatt
gggaagctgtcggagctgaaagagctctccgtttcccacaacaggattggtaacccattt
ccacatgaagttgttcactgtaaaaaactcgaaatcctcgaccttcaaaacaacaagttt
tccggcgagataccgtcgaatttgtcttctttggttcatctccgagttctcgatttatct
tccaataagttcaccggtgacttgaccttcttgaagtattttcccaacttggaaaatctt
tcccttgccaacaatctgttttccggtaaaatcccatcatctatacgttcgtttcgaaac
cttcggttctttgatttctcagggaacaatttccttgaaggttctgctccattgatgagc
caaattgatgaatcaacagtatctcagtaccccaaacggtacacttttgctgagaggaaa
tcaacaaacaatagcagaagcagagctcaagctccatcaccaattggaagcaaatcagta
accggtgaaggtcctagctcatcaccagtaactcaacaccgacacaaaaataagagtaaa
aaagcaatggaatggctgttgggattcttttctggagctgtaggtgggggcatatttggg
ttcgtcttctctgttatgtttaaactggtgttggcaaccattttaggagctgctaaagat
cctggtccatccatattcagtccattgattaagaaagctgaggatttatcgtttttagag
aaagaagatgggttggcttcattggagatcatagggaaaggggggtgtggggaagtatat
aaagctgaattaccaggaagtgatggcaaaatgattgctattaagaaaattattcaaccc
ccaaaagatgcagctgagttaactgatgaagatagcaagcttctcaacaagaaaatgcgt
caaatcaaatcagagatcaccacagtaggccaaattcgacataggaatcttcttccgttg
ttggctcatatttctcgacccgactgtcactaccttgtgtatgaattcatgaagaatgga
agcttgcaagacatcttacaacaagtatcagaaggcacaagggagctagattggcttgcg
cggcagaggatagcaaaaggagtggctgctgggcttgaatatcttcacatgcaccatagc
cctcgaatcattcatagagatttgaaaccagggaacatcctccttgatgatgaaatggaa
gccaggattgcagatttcgggcttgcaaaagcaatgcctgatgcacaaactcatattacc
acttccaatttggctggaactgtggggtatatagcacctgaatatcatcaaacacttaag
tttactgataagtgtgatatttatagctttggggttatacttagtgttttggtgatgggg
aagctaccatctgatacgttctttcaacacactgatgagatgagtttagtgaaatggatg
agaaacatcatgatttcagacaaccccacaacagccatagatcctaaactgattggaaaa
gggtttgaagatcaaatgattctggttttgaagattgcgtatttctgcacgttggatgat
ccaaaggagagaccaaacagcaaagatgtcagatgcatgttgtctcaaatcaagagttaa
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