Gossypium hirsutum (upland cotton): 107949781
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Entry
107949781 CDS
T04793
Name
(RefSeq) serine/arginine repetitive matrix protein 2 isoform X1
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
Torus
Surp
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
107949781
NCBI-ProteinID:
XP_016740024
UniProt:
A0A1U8NPY1
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Position
D03:complement(39107857..39115353)
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AA seq
1563 aa
AA seq
DB search
MYAQGNRNPQPGQGPPEPISSPYQQLPPGPPAPSPQFRQGPSGFPLYQHGPAAPHQTPPG
GLPNTGQSYLRLPAHVHAGAPLPRMYPTAQQNSQHHLHLGTQNALNMPQPVLPPPISASY
PEVSQTQPRFRALPPPPPQSQGQTFYRAAVNPLPEQRGLLHISPHQPPPPTTSFFTSGPL
GSFVQPTGGDHRVPSTSSLPLPPPPPPPSFPPPNLPSPPTSTSTVLSSSKPVQNVSNLPC
NLDSDDSKLSTSGSVGVAVAPNQAKHNLVTDNGSPNMRGENGCNMSSLVGGKLLLQEGLI
MDLSSTPPKPTDENVIERIEALCQGIAKNGPDYEDMVRKNESEKPDYAFLYGGEPGSEAA
IAHDFFRWMKKKSMFACKLDEQQGVSSLRPSGKESSEQACHLVAAASHLPDDSDMEMEDD
ITQIDDDQGMNQMLEGLKSQCDISDNMLNVEEKLRPPQMSTGWNASILPENTSAAGSSSL
GEQGQEGITNVDQLAFEASVSEVNLVKLTVPTKQPIVTSLEKSNTSDQLAKGGCPFRLLQ
DYTSDDNSEKDIETGIGNMNAPFGASLENASSPLQTEKGFGPLSNMPYKVASSEVVEGTS
TTSIMNENEHADHKDVQKVSRNHVASVEVLQKENVMVGGSVESIMFREEEENLILGSQHK
VDKFGRLARNGGSDSDSDDSDYVGRHRRGRTRSRSQSRSPTDRRKRRSPRRTRRRKKRSL
SRSWSPRNRRSRSRSPRNRRSRSRSPRNHRSRSRSPRNRRSRSRSPRNRRSRSRSPYLRR
ADEFSAENKRRTKGQMQFCFDFRRGRCYRGVSCRFLHHDSGKSDESRWQKSKQQLEFPHN
SRTNIRDEIKQISEKVADHERGEVRGPEVKLYGNFVASRDGSTNLNIEDSVGGGILKQDD
QSTEYHMVKYEESRDIPASVSETNLVEDMKEGPNLVTNENCQEAAVESHHLSTVNAVSVG
DTDKLNSSGHASQKILISFKKPVDQKSLSRSLDPVSQNVDCLPQQSGNSSISDSSHKTSA
SSPNRLWERNAYQNTMELHNHSSHIGNPDTKQRQAASSMSHSSGESFPSYMLPDQQSYFA
LQPQSSLASLPPPPPPLKPLDSTITPGVSSHFRQSHLPLRNDFGSEIIPRPYPTELPAHS
QSDWFQQRAYITIQEANRPVIHTPLPVSNLPIQQLGAPSKSGDDGLTHPPMQNVFASNSF
AQGNTYPHAMPISQQFLGNKMQPFPGESLPPGGLSNSSSYIHPYPQQQQPPHSLHHPMAD
RIYNPAGKMNSSLKDPPDIKDATSHHIDIGGSTTTFPNEHAPTLDQPINFKYHSHVIQEK
GTTYNNTHFSLAHAPVDGRRIGLQEATSSPNSARDIGQNSSRSGGDQYDPLFDSIEPSTR
LSRKFDHMQKLEVTGDSGILLGLSDSNKPLDMEEKAKDAGAVTSAASADNEEFGETADAE
VGTVENGNPSRPAEVNMATGEIEMDQIKSPGKSKKSKDSRSMKLFKVAIADFVKEVLKPS
WQQGNMSKEAFKTIVKKTVDKVSGAMKNHQIPKSRAKIDHYIESSQRKLTKLVMGYVDKY
VKV
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctcaagggaatcgtaatcctcagccagggcagggtcctccggaacccatatca
tctccatatcaacagctccctcccggtccgcctgctccttcacctcaattccggcaaggc
ccatcaggctttccactatatcagcatggtcctgctgcacctcatcaaactccccctggt
gggttgccaaatacaggtcaatcttatctacgcctacctgcgcatgttcatgcaggtgcc
ccattgccacgaatgtatccgacggctcaacagaactcacaacaccatttacatttaggg
acccagaatgcacttaatatgcctcagccggtgcttcctcctccaattagtgcatcatac
ccagaggtttcacagacccagccacgttttagagcattacctcctccccctcctcaatcc
caggggcaaacattttatagagcagcagtgaatccactacctgagcagcgaggacttcta
catatctcaccacatcaaccgccccctcctacaacaagtttcttcacttcaggtccactt
ggaagctttgtacaaccaacaggtggagatcaccgtgttccatctacctcttctctcccc
ctcccaccaccaccacctccaccttcttttccaccacctaatctaccatctcctccaact
tccacctctactgttctttcatcttctaagcctgtgcaaaatgtttccaacttaccctgt
aatttggactcggatgactctaagttaagcacttcaggttctgtcggtgtagctgtggct
ccaaatcaggccaaacacaatttagttacagataatggctctccgaatatgagaggggaa
aatggctgcaacatgagttctctggttggaggtaagttactgttacaagagggtttgatc
atggacctttcttccactcctcctaagccaacagatgaaaatgttattgaaaggattgaa
gctttatgccagggcattgctaagaatgggcctgattatgaggacatggttcgtaaaaat
gaatctgaaaagccagactatgcatttctgtatggtggtgagccaggaagtgaagctgca
atagcacatgattttttccggtggatgaaaaagaaaagtatgtttgcatgtaaattagat
gaacagcaaggagtttcatctttgaggccatcaggaaaagagtcctcagagcaagcctgc
catttggttgcagctgcatctcatttgcctgatgattctgacatggagatggaagacgat
atcacccaaattgatgatgatcagggaatgaatcaaatgctcgaaggccttaagagtcag
tgtgatattagtgataacatgcttaatgtagaagagaagttacgtccaccgcaaatgtcg
actggatggaatgcgtccattttaccagaaaacacatcagctgcgggcagttctagtttg
ggtgaacaaggtcaagaaggtattaccaatgttgaccaattggcttttgaggcatctgtt
tctgaagttaacttagtcaaattaactgtacctactaaacagcctatagtcactagtttg
gagaaatcgaatacttccgatcaacttgcaaaaggtggctgtccattcagacttctacaa
gactatacttctgatgacaattcagaaaaagatattgagactggcattggaaatatgaat
gcgccatttggtgctagtttggagaatgctagtagtcccctccagactgaaaaggggttt
ggaccactatcaaacatgccatacaaagttgcaagctcagaagtggttgaaggtactagc
acaacttccatcatgaatgagaatgaacatgctgatcataaggatgtacagaaagtgtct
agaaatcatgttgcttctgtggaggttctccaaaaagaaaacgtaatggttggtggtagt
gttgaaagtattatgtttagggaagaggaagagaacttgattcttggttctcaacataag
gtagataagtttgggcgactggctaggaatggtggtagtgacagtgattctgatgattca
gactatgttgggaggcacagaaggggaagaactcgaagcagaagtcagagtcgttcacct
acagatagaaggaaaaggagaagtccacggaggactaggagaaggaagaaacgaagccta
tcacgcagttggtctcccagaaaccggagaagcagaagcaggtctcccagaaatcgtaga
agcaggagcaggtctcctagaaatcatagaagcaggagcaggtctcccagaaaccgaaga
agcaggagtaggtctcccagaaatcgaagaagcaggagcaggtctccctatttgcgtcgt
gctgatgagttcagtgctgagaataagagacgaacgaagggacaaatgcaattctgtttt
gacttccgtcgaggcaggtgctatcgtggagtgtcttgtcgttttctgcaccatgattct
ggcaagagtgatgaatcaaggtggcaaaagagcaaacagcagctggagtttcctcataat
tctaggaccaatattcgtgatgagatcaagcagatctctgagaaagttgccgatcatgag
cgtggtgaagttagaggtccagaagtaaaactgtatggcaattttgttgcttcaagagat
gggagtactaatctgaatattgaagattctgttggtggaggtattcttaaacaagatgat
caatcaactgagtatcacatggttaaatatgaggaatctagagacattccagcctctgtt
tctgaaacaaacttggtagaagacatgaaggaagggcctaatctcgtcactaatgaaaat
tgtcaagaagcagcagtagagtctcaccacctatcaactgttaatgcagtgtcagtaggg
gatactgataaactgaattcaagtggtcatgcttctcagaaaatacttatttctttcaaa
aaacctgttgaccagaaatctctctccagatctttagatccagtgagccaaaatgttgat
tgcctgcctcaacaatcaggtaactcgtccatatctgattcttctcataaaacatctgca
tcctcaccaaataggctttgggaaagaaatgcttatcaaaatacaatggagctccataat
cattcttctcatattggcaatccagatacgaaacagcggcaggctgcatcttccatgtct
cattcttctggggaaagctttccttcttacatgttacctgaccaacagtcctactttgct
ctacagccacaatcctctttggcttccttgcctccaccaccaccaccactgaaaccactt
gattcaactataactcctggtgtttcttcacattttcggcagagtcacttgcctttgagg
aatgattttggttcagaaattatcccaaggccttatccaactgaattgcctgcacattct
cagtctgattggtttcaacagcgagcttatattacaattcaggaagcaaatcgacctgtc
atacatacacctttacctgtcagtaacctgcccattcaacaacttggagctcctagtaag
tcgggagatgatggtttgacgcaccctccaatgcagaatgtgtttgcttcaaattctttt
gctcagggaaacacttaccctcatgctatgcccatttcacagcagtttctgggtaacaaa
atgcaaccattccctggtgagagtttgccaccaggtggactttctaactcatcttcatat
attcatccttatccacagcagcaacaacctccgcacagtttgcaccaccctatggcagac
cgtatatataatcctgcagggaagatgaattcttcattaaaagatccaccagatattaaa
gatgcaacatcccaccatattgatattggaggatctactacaacgtttccaaatgagcat
gcacctactcttgatcagcctataaatttcaaataccattctcatgttatacaagaaaaa
ggtacaacctacaataacacacatttcagtttggctcatgctccagttgatgggagacgc
attggattgcaagaagcaacttcctcacccaattctgcccgggacattgggcagaattct
tctagatcaggtggcgatcagtatgatccgctttttgatagcattgagccttctacaagg
ttatccagaaaatttgatcatatgcaaaagttggaagtgacaggtgattctggcatctta
ttggggcttagtgattccaataaaccactggatatggaggaaaaagccaaggatgctgga
gctgttacttctgcagcatcggcagataacgaggaatttggtgagactgctgatgctgaa
gttggtactgttgagaatggaaacccaagtcgtccagctgaagttaatatggctactggt
gagattgagatggatcagataaagtctccagggaagagcaagaagagcaaagattccaga
tcaatgaagcttttcaaggttgccattgcagattttgtgaaggaggttttgaagccgtca
tggcaacagggtaatatgagcaaggaggctttcaagactattgtaaagaagactgttgat
aaagtatcaggagctatgaagaaccaccagatacccaaatcgcgtgcaaagattgatcac
tatattgagtcatctcagcggaaattgacaaaacttgtgatgggttatgttgataagtat
gtcaaagtataa
DBGET
integrated database retrieval system
